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Using GPU Accelerators - LatchBio

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0-32-14.3-32-32zM448 416c0 17.7-14.3 32-32 32H32c-17.7 0-32-14.3-32-32s14.3-32 32-32H416c17.7 0 32 14.3 32 32z"></path></svg></button><div class="ml-4 flex text-sm leading-6 whitespace-nowrap min-w-0 space-x-3"><div class="flex items-center space-x-3"><span>Nextflow</span><svg width="3" height="24" viewBox="0 -9 3 24" class="h-5 rotate-0 overflow-visible fill-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div><div class="font-semibold text-gray-900 truncate dark:text-gray-200">Using GPU Accelerators</div></div></div></div><div class="hidden lg:flex px-12 h-12"><div class="h-full flex text-sm space-x-6"><a class="group relative h-full flex items-center text-gray-800 dark:text-gray-200 font-semibold" href="/start/introduction">Documentation<div class="absolute bottom-0 h-[1.5px] w-full bg-primary dark:bg-primary-light"></div></a><a href="https://docs.latch.bio/api/modules.html" target="_blank" rel="noreferrer" class="group relative h-full flex items-center font-medium text-gray-600 dark:text-gray-400 group-hover:text-gray-800 dark:group-hover:text-gray-300">API References<div class="absolute bottom-0 h-[1.5px] w-full group-hover:bg-gray-200 dark:group-hover:bg-gray-700"></div></a><a href="https://latchbio.substack.com/" target="_blank" rel="noreferrer" class="group relative h-full flex items-center font-medium text-gray-600 dark:text-gray-400 group-hover:text-gray-800 dark:group-hover:text-gray-300">Blog<div class="absolute bottom-0 h-[1.5px] w-full group-hover:bg-gray-200 dark:group-hover:bg-gray-700"></div></a><a href="https://latch.bio/" target="_blank" rel="noreferrer" class="group relative h-full flex items-center font-medium text-gray-600 dark:text-gray-400 group-hover:text-gray-800 dark:group-hover:text-gray-300">Website<div class="absolute bottom-0 h-[1.5px] w-full group-hover:bg-gray-200 dark:group-hover:bg-gray-700"></div></a><a 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hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/start/introduction"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/house.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Introduction</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/data/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/file-chart-column.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Data</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/registry/what-is-a-registry"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/table.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Registry</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-semibold text-primary dark:text-primary-light" href="/workflows/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary bg-primary"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-white" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/screwdriver-wrench.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Workflows &amp; SDK</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/pods/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/hexagon.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Pods</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/plots/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/chart-scatter-bubble.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Plots</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/admin/overview"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/screen-users.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Administration</a></li><li class="list-none"><a class="pl-4 group flex items-center lg:text-sm lg:leading-6 mb-5 sm:mb-4 font-medium text-gray-600 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" href="/resources/faq"><div class="mr-4 rounded-md p-1 group-hover:bg-primary zinc-box group-hover:brightness-100 group-hover:ring-0 ring-1 ring-gray-950/5 dark:ring-gray-700/40"><svg class="h-4 w-4 secondary-opacity group-hover:fill-primary-dark group-hover:bg-white bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/clipboard-question.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg></div>Resources</a></li><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Overview</h5><ul><li id="/workflows/overview" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/overview"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/magnifying-glass.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Workflows &amp; SDK</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Workflows</h5><ul><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Verified Workflows</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li id="/workflows/csv-import" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/csv-import"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/file-import.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>CSV Parameter Import</div></div></a></li><li id="/workflows/resource-monitoring" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/resource-monitoring"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/memory.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Resource Monitoring</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Python SDK</h5><ul><li id="/workflows/sdk/getting-started/quick-start" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/getting-started/quick-start"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/play.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Quick Start</div></div></a></li><li id="/workflows/sdk/getting-started/authorizing-your-own-workflow" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/getting-started/authorizing-your-own-workflow"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/duotone/arrow-progress.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Authoring your Own Workflow</div></div></a></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Workflow Concepts</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Testing and Debugging a Workflow</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Nextflow</h5><ul><li id="/workflows/sdk/nextflow/overview" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/overview"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/magnifying-glass.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Overview</div></div></a></li><li id="/workflows/sdk/nextflow/tutorial" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/tutorial"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/book.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Tutorial</div></div></a></li><li id="/workflows/sdk/nextflow/profiles" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/profiles"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/user.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Execution Profiles</div></div></a></li><li id="/workflows/sdk/nextflow/caching" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/caching"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/window-restore.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Caching and Resuming</div></div></a></li><li id="/workflows/sdk/nextflow/registries" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/registries"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/lock.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Private Registries</div></div></a></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Customizing Your Interface</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li id="/workflows/sdk/nextflow/dependencies" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/nextflow/dependencies"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/arrow-progress.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Dependencies</div></div></a></li><li id="/workflows/sdk/nextflow/gpus" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg bg-primary/10 text-primary font-semibold dark:text-primary-light dark:bg-primary-light/10" style="padding-left:1rem" href="/workflows/sdk/nextflow/gpus"><svg class="h-4 w-4 bg-primary dark:bg-primary-light" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/microchip.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Using GPU Accelerators</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Snakemake</h5><ul><li id="/workflows/sdk/snakemake/quickstart" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/quickstart"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/play.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Quick Start</div></div></a></li><li id="/workflows/sdk/snakemake/cloud" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/cloud"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/cloud.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Snakemake Workflow Cloud Compatibility</div></div></a></li><li><div class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem"><div>Advanced Configuration</div><svg width="3" height="24" viewBox="0 -9 3 24" class="transition-transform text-gray-400 overflow-visible group-hover:text-gray-600 dark:text-gray-600 dark:group-hover:text-gray-400"><path d="M0 0L3 3L0 6" fill="none" stroke="currentColor" stroke-width="1.5" stroke-linecap="round"></path></svg></div></li><li id="/workflows/sdk/snakemake/tutorial" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/tutorial"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/book.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Tutorial</div></div></a></li><li id="/workflows/sdk/snakemake/debugging" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/debugging"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/bug-slash.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Debugging Snakemake</div></div></a></li><li id="/workflows/sdk/snakemake/troubleshooting" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/troubleshooting"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/bugs.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Troubleshooting</div></div></a></li><li id="/workflows/sdk/snakemake/backend" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/snakemake/backend"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/archway.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Architecture Overview</div></div></a></li></ul></div><div class="mt-12 lg:mt-8"><h5 class="pl-4 mb-3.5 lg:mb-2.5 font-semibold text-gray-900 dark:text-gray-200">Automation</h5><ul><li id="/workflows/sdk/automation/overview" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/automation/overview"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/robot.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Workflows Automations</div></div></a></li><li id="/workflows/sdk/automation/example-data-addition" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/automation/example-data-addition"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/table.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Example Data Addition Trigger</div></div></a></li><li id="/workflows/sdk/automation/example-interval" class="scroll-m-4 first:scroll-m-20"><a class="group mt-2 lg:mt-0 flex items-center pr-3 py-1.5 cursor-pointer focus:outline-primary dark:focus:outline-primary-light space-x-3 rounded-lg hover:bg-gray-600/5 dark:hover:bg-gray-200/5 text-gray-700 hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300" style="padding-left:1rem" href="/workflows/sdk/automation/example-interval"><svg class="h-4 w-4 bg-gray-400 dark:bg-gray-500" style="-webkit-mask-image:url(https://mintlify.b-cdn.net/v6.6.0/solid/alarm-snooze.svg);-webkit-mask-repeat:no-repeat;-webkit-mask-position:center"></svg><div class="flex-1 flex items-center space-x-2.5"><div>Example Interval Trigger</div></div></a></li></ul></div></div></div></div></div><div class="" id="content-container"><div class="flex flex-row gap-12 box-border w-full pt-40 lg:pt-10"><div class="relative grow box-border flex-col w-full mx-auto px-1 lg:pl-[23.7rem] lg:-ml-12 xl:w-[calc(100%-28rem)]" id="content-area"><header id="header" class="relative"><div class="mt-0.5 space-y-2.5"><div class="eyebrow h-5 text-primary dark:text-primary-light text-sm font-semibold">Nextflow</div><div class="flex items-center"><h1 class="inline-block text-2xl sm:text-3xl font-extrabold text-gray-900 tracking-tight dark:text-gray-200">Using GPU Accelerators</h1></div></div></header><div class="flex flex-col gap-8"><div class="flex flex-col gap-6 xl:hidden [&amp;:not(:empty)]:mt-8"></div></div><div class="relative mt-8 prose prose-gray dark:prose-invert"><p>Latch supports using Nextflow <a href="https://www.nextflow.io/docs/latest/reference/process.html#accelerator" target="_blank" rel="noreferrer">accelerators</a> to allow processes to leverage GPU compute.</p> <h2 class="flex whitespace-pre-wrap group" id="caveats"><div class="absolute"><a href="#caveats" class="-ml-10 flex items-center opacity-0 border-0 group-hover:opacity-100" aria-label="Navigate to header">​<div class="w-6 h-6 text-gray-400 rounded-md flex items-center justify-center zinc-box bg-white ring-1 ring-gray-400/30 dark:ring-gray-700/25 hover:ring-gray-400/60 dark:hover:ring-white/20"><svg xmlns="http://www.w3.org/2000/svg" fill="gray" height="12px" viewBox="0 0 576 512"><path d="M0 256C0 167.6 71.6 96 160 96h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C98.1 144 48 194.1 48 256s50.1 112 112 112h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C71.6 416 0 344.4 0 256zm576 0c0 88.4-71.6 160-160 160H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c61.9 0 112-50.1 112-112s-50.1-112-112-112H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c88.4 0 160 71.6 160 160zM184 232H392c13.3 0 24 10.7 24 24s-10.7 24-24 24H184c-13.3 0-24-10.7-24-24s10.7-24 24-24z"></path></svg></div></a></div><span class="cursor-pointer">Caveats</span></h2> <p>GPU enabled nodes have very strictly constrained compute parameters. As a result, specifying an accelerator will <strong>override any <code>cpu/memory</code> settings</strong>, with overridden values changing depending on the chosen accelerator.</p> <h2 class="flex whitespace-pre-wrap group" id="supported-accelerators"><div class="absolute"><a href="#supported-accelerators" class="-ml-10 flex items-center opacity-0 border-0 group-hover:opacity-100" aria-label="Navigate to header">​<div class="w-6 h-6 text-gray-400 rounded-md flex items-center justify-center zinc-box bg-white ring-1 ring-gray-400/30 dark:ring-gray-700/25 hover:ring-gray-400/60 dark:hover:ring-white/20"><svg xmlns="http://www.w3.org/2000/svg" fill="gray" height="12px" viewBox="0 0 576 512"><path d="M0 256C0 167.6 71.6 96 160 96h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C98.1 144 48 194.1 48 256s50.1 112 112 112h72c13.3 0 24 10.7 24 24s-10.7 24-24 24H160C71.6 416 0 344.4 0 256zm576 0c0 88.4-71.6 160-160 160H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c61.9 0 112-50.1 112-112s-50.1-112-112-112H344c-13.3 0-24-10.7-24-24s10.7-24 24-24h72c88.4 0 160 71.6 160 160zM184 232H392c13.3 0 24 10.7 24 24s-10.7 24-24 24H184c-13.3 0-24-10.7-24-24s10.7-24 24-24z"></path></svg></div></a></div><span class="cursor-pointer">Supported Accelerators</span></h2> <p>Latch supports the following accelerator types:</p> <ol> <li><code>nvidia-t4</code>: This allows a process to use an Nvidia T4 GPU for compute. A process specifying <code>type: &#x27;nvidia-t4&#x27;</code> can use only 1 GPU. Choosing <code>nvidia-t4</code> will override and set <code>cpu: 7</code> and <code>memory: &quot;30Gi&quot;</code>.</li> <li><code>nvidia-a10g</code>: This allows a process to use an Nvidia A10G GPU for compute. A process specifying <code>type: &#x27;nvidia-a10g&#x27;</code> can use only 1 GPU. Choosing <code>nvidia-a10g</code> will override and set <code>cpu: 64</code> and <code>memory: &quot;256Gi&quot;</code>.</li> <li><code>nvidia-v100</code>: This allows a process to use an Nvidia V100 GPU for compute. A process specifying <code>type: &#x27;nvidia-v100&#x27;</code> can choose between 1, 4, or 8 GPUs. Choosing <code>nvidia-v100</code> will override and set resources differently depending on the number of GPUs specified:<!-- --> <ul> <li>Choosing 1 GPU will override and set <code>cpu: 7</code> and <code>memory: &quot;48Gi&quot;</code>,</li> <li>Choosing 4 GPUs will override and set <code>cpu: 30</code> and <code>memory: &quot;230Gi&quot;</code>, and</li> <li>Choosing 8 GPUs will override and set <code>cpu: 62</code> and <code>memory: &quot;400Gi&quot;</code>.</li> </ul> </li> </ol></div><div class="leading-6 mt-14"><div class="pb-16 w-full"><div class="flex flex-col gap-y-4 xl:flex-col xl:gap-6 min-[1400px]:flex-row md:flex-row md:justify-end"><div class="flex flex-row gap-5 items-center grow justify-between md:justify-start xl:justify-between min-[1400px]:justify-start"><p class="text-sm text-gray-600 dark:text-gray-400">Was this page helpful?</p><div class="flex flex-row gap-3 items-center"><button class="px-[14px] py-2 flex flex-row gap-[10px] items-center border rounded-lg 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href="#supported-accelerators" class="py-1 block hover:text-gray-900 dark:text-gray-400 dark:hover:text-gray-300">Supported Accelerators</a></li></ul></div></div></div></div></div></div></main></div><script id="__NEXT_DATA__" type="application/json">{"props":{"pageProps":{"mdxSource":{"compiledSource":"/*@jsxRuntime automatic @jsxImportSource react*/\nconst {Fragment: _Fragment, jsx: _jsx, jsxs: _jsxs} = arguments[0];\nconst {useMDXComponents: _provideComponents} = arguments[0];\nfunction _createMdxContent(props) {\n const _components = Object.assign({\n p: \"p\",\n a: \"a\",\n code: \"code\",\n ol: \"ol\",\n li: \"li\",\n ul: \"ul\"\n }, _provideComponents(), props.components), {Heading} = _components;\n if (!Heading) _missingMdxReference(\"Heading\", true);\n return _jsxs(_Fragment, {\n children: [_jsxs(_components.p, {\n children: [\"Latch supports using Nextflow \", _jsx(_components.a, {\n href: \"https://www.nextflow.io/docs/latest/reference/process.html#accelerator\",\n children: 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