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208.295H227.953V209.095H308.679V208.295ZM437.995 355.397C369.083 350.838 313.867 295.704 309.536 227.005L308.737 227.055C313.094 296.159 368.632 351.61 437.942 356.195L437.995 355.397ZM438.369 436.196V355.796H437.569V436.196H438.369ZM228.028 227.046C232.521 340.596 323.996 431.876 437.952 436.596L437.985 435.797C324.443 431.094 233.304 340.146 228.828 227.014L228.028 227.046ZM309.136 226.63H228.428V227.43H309.136V226.63Z" fill="url(#paint0_linear_3402_2544)" fill-opacity="0.42" mask="url(#path-1-inside-1_3402_2544)"></path></g></g><defs><linearGradient id="paint0_linear_3402_2544" x1="53.6884" y1="18.5797" x2="401.635" y2="381.274" gradientUnits="userSpaceOnUse"><stop stop-color="white"></stop><stop offset="1" stop-color="white" stop-opacity=".3"></stop></linearGradient></defs></svg></div></div></div></div></div></div><div class="container_container__7U8A5 page_section__9DPCt"><div class="page_sectionHeader__CGuvh"><h2 class="h4 regular">The best place to run Nextflow pipelines</h2><p class="p-lg">Latch solves the issues hosting infrastructure for Nextflow pipelines and delivering workflows to scientists.</p></div><div class="page_twoColSection__1izRI"><div class="page_sectionText__mYi0P page_centered__Kw0Jx"><h3 class="h4 regular">User-friendly, Type-safe Interfaces</h3><p class="p-md">Latch’s integration with Nextflow allows developers to build user-friendly graphical interfaces for their workflows and expose them to wet lab scientists.</p><div class="page_sectionFeaturesList__1GY0r"><p class="p-s"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-folder-input"><path d="M2 9V5a2 2 0 0 1 2-2h3.9a2 2 0 0 1 1.69.9l.81 1.2a2 2 0 0 0 1.67.9H20a2 2 0 0 1 2 2v10a2 2 0 0 1-2 2H4a2 2 0 0 1-2-2v-1"></path><path d="M2 13h10"></path><path d="m9 16 3-3-3-3"></path></svg> No changes required to existing Nextflow code</p><p class="p-s"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-code-xml"><path d="m18 16 4-4-4-4"></path><path d="m6 8-4 4 4 4"></path><path d="m14.5 4-5 16"></path></svg> Customizable interface via an additional Python file</p><p class="p-s"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-hard-drive"><line x1="22" x2="2" y1="12" y2="12"></line><path d="M5.45 5.11 2 12v6a2 2 0 0 0 2 2h16a2 2 0 0 0 2-2v-6l-3.45-6.89A2 2 0 0 0 16.76 4H7.24a2 2 0 0 0-1.79 1.11z"></path><line x1="6" x2="6.01" y1="16" y2="16"></line><line x1="10" x2="10.01" y1="16" y2="16"></line></svg> Bring data from anywhere - AWS, GCP, SRA, BaseSpace, and more.</p></div></div><div class="page_sectionGraphic__hVPOT"><div class="page_codeSlider__3IyB3" style="position:relative;overflow:hidden;user-select:none;-khtml-user-select:none;-ms-user-select:none;-moz-user-select:none;-webkit-user-select:none" data-rcs="root"><img class="rounded-xl" src="/_next/static/media/hasp_crispr-ui.b87b0802.png" alt="Image two" style="display:block;width:100%;height:100%;max-width:100%;box-sizing:border-box;object-fit:cover;object-position:center" data-rcs="image"/><div style="position:absolute;top:0;left:0;width:100%;height:100%;will-change:clip;user-select:none;-khtml-user-select:none;-moz-user-select:none;-webkit-user-select:none" data-rcs="clip-item"><img class="rounded-lg" src="/_next/static/media/hasp_crispr-code.724d1457.svg" alt="Image one" style="display:block;width:100%;height:100%;max-width:100%;box-sizing:border-box;object-fit:cover;object-position:center" data-rcs="image"/></div><div style="position:absolute;top:0;width:100%;height:100%;pointer-events:none" data-rcs="handle-container"><div style="position:absolute;width:100%;transform:translateY(-50%);pointer-events:all"><div class="__rcs-handle-root" style="display:flex;flex-direction:row;place-items:center;height:100%;cursor:ns-resize;pointer-events:none;color:#fff"><div class="__rcs-handle-line" style="flex-grow:1;height:2px;width:100%;background-color:currentColor;pointer-events:auto;box-shadow:0 0 7px rgba(0,0,0,.35);opacity:0;cursor:grab"></div><div class="__rcs-handle-button" style="display:grid;grid-auto-flow:column;gap:8px;place-content:center;flex-shrink:0;width:56px;height:56px;border-radius:50%;border-style:solid;border-width:2px;pointer-events:auto;backdrop-filter:blur(7px);-webkit-backdrop-filter:blur(7px);box-shadow:none;transform:rotate(90deg);border:.5px solid rgba(255,255,255,.3);background-color:rgba(16, 20, 38, .4);cursor:grab"><div style="width:0;height:0;border-top:8px solid transparent;border-right:10px solid;border-bottom:8px solid transparent"></div><div style="width:0;height:0;border-top:8px solid transparent;border-right:10px solid;border-bottom:8px solid transparent;transform:rotate(180deg)"></div></div><div class="__rcs-handle-line" style="flex-grow:1;height:2px;width:100%;background-color:currentColor;pointer-events:auto;box-shadow:0 0 7px rgba(0,0,0,.35);opacity:0;cursor:grab"></div></div></div></div></div></div></div><div class="page_developersSection__oHzlb"><div class="page_twoColSection__1izRI"><div class="page_sectionText__mYi0P"><h3 class="h4 regular">Built for Developers</h3></div><div></div></div><div class="page_twoColSection__1izRI"><div class="page_sectionText__mYi0P"><p class="p-md">Nextflow on Latch provides managed cloud infrastructure for executing, debugging, and analyzing workflows.</p><p class="p-md">It uses a customized Nextflow Kubernetes plugin to run processes in containers within Latch’s Kubernetes cluster, which allows developers to use existing Nextflow projects with minimal code alterations.</p></div><div class="page_sectionText__mYi0P"><p class="p-md">Intermediate outputs are shared via AWS EFS, and final outputs can be uploaded to Latch Data using a custom plugin.</p><p class="p-md">The Latch Console features a Directed Acyclic Graph (DAG) for monitoring progress, checking logs, and analyzing process costs and runtime. Developers also have real-time access to the container for debugging purposes.</p></div></div><div class="page_fakeBentoGrid__DtUib"><div class="page_fakeBentoBox__aYKoX"><div class="page_content__ozIQU"><h4 class="h5 color-dark regular">Deploy existing Nextflow workflows with minimal changes</h4><p class="p-s color-light">Migrate Nextflow workflows to LatchBio in three simple steps while maintaining full portability.</p></div><img alt="Nextflow nf-core rna-seq project folder structure with code registration command in LatchBio for efficient workflow deployment." loading="lazy" width="2156" height="1232" decoding="async" data-nimg="1" class="page_bentoImage__CwtoP" style="color:transparent" srcSet="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-file-structure.6083c1fb.webp&w=3840&q=75 1x" src="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-file-structure.6083c1fb.webp&w=3840&q=75"/></div><div class="page_fakeBentoBox__aYKoX"><div class="page_content__ozIQU"><h4 class="h5 color-dark regular">Boost pipeline throughput and reduce cost via a shared filesystem</h4><p class="p-s color-light">Improve performance by using a shared filesystem for efficient data handling.</p></div><img alt="Nextflow tasks using a shared filesystem to boost pipeline throughput, showing efficient data handling across different stages." loading="lazy" width="2156" height="1232" decoding="async" data-nimg="1" class="page_bentoImage__CwtoP" style="color:transparent" srcSet="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-shared-file-system.6cc03dff.webp&w=3840&q=75 1x" src="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-shared-file-system.6cc03dff.webp&w=3840&q=75"/></div><div class="page_fakeBentoBox__aYKoX"><div class="page_content__ozIQU"><h4 class="h5 color-dark regular">Optimize workflows with real-time per process cost and runtime reporting</h4><p class="p-s color-light">Get real-time insights on costs and runtime for each process to optimize workflow efficiency.</p></div><img alt="Graphical report of Nextflow task CPU usage and runtime over time, providing real-time performance insights for workflow optimization." loading="lazy" width="2156" height="1232" decoding="async" data-nimg="1" class="page_bentoImage__CwtoP" style="color:transparent" srcSet="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-runtime-report.597ec9a2.webp&w=3840&q=75 1x" src="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-runtime-report.597ec9a2.webp&w=3840&q=75"/></div><div class="page_fakeBentoBox__aYKoX"><div class="page_content__ozIQU"><h4 class="h5 color-dark regular">Scalable and reliable for large workloads</h4><p class="p-s color-light">Handle large-scale workflows with LatchBio’s scalable, high-performance infrastructure.</p></div><img alt="Visualization of a Nextflow workflow DAG showing parallel tasks with runtime in a bioinformatics pipeline, from input to output." loading="lazy" width="2156" height="1232" decoding="async" data-nimg="1" class="page_bentoImage__CwtoP" style="color:transparent" srcSet="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-dag.2dae9266.webp&w=3840&q=75 1x" src="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-dag.2dae9266.webp&w=3840&q=75"/></div><div class="page_fakeBentoBox__aYKoX"><div class="page_content__ozIQU"><h4 class="h5 color-dark regular">Retry from failed tasks</h4><p class="p-s color-light">Modify workflow code with a quick fix and relaunch from the failed task without re-entering parameters or restarting the entire workflow.</p></div><img alt="Nextflow interface showing the ability to relaunch a workflow from a failed task, ensuring recovery without restarting from the beginning." loading="lazy" width="2156" height="1232" decoding="async" data-nimg="1" class="page_bentoImage__CwtoP" style="color:transparent" srcSet="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-retry-from-failed.4fd411dc.webp&w=3840&q=75 1x" src="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-retry-from-failed.4fd411dc.webp&w=3840&q=75"/></div><div class="page_fakeBentoBox__aYKoX"><div class="page_content__ozIQU"><h4 class="h5 color-dark regular">Designed for reproducibility with GitHub integration</h4><p class="p-s color-light">Ensure reproducibility with automatic linking of workflow versions to corresponding GitHub commits.</p></div><img alt="Version control view showing Nextflow workflow releases linked to GitHub commits for automatic reproducibility and tracking." loading="lazy" width="2156" height="1232" decoding="async" data-nimg="1" class="page_bentoImage__CwtoP" style="color:transparent" srcSet="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-github-commit.64c879d2.webp&w=3840&q=75 1x" src="/_next/image?url=%2F_next%2Fstatic%2Fmedia%2Fnextflow-github-commit.64c879d2.webp&w=3840&q=75"/></div></div></div><div class="page_twoColSection__1izRI"><div class="page_sectionText__mYi0P page_centered__Kw0Jx"><h3 class="h4 regular">Downstream analysis tooling</h3><p class="p-md">With Latch, scientists are no longer left with just raw output files in cloud storage systems. Easily pull results into interactive visualizations to make critical scientific decisions.</p><div class="page_sectionFeaturesList__1GY0r"><p class="p-s"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-chart-column-big"><path d="M3 3v16a2 2 0 0 0 2 2h16"></path><rect x="15" y="5" width="4" height="12" rx="1"></rect><rect x="7" y="8" width="4" height="9" rx="1"></rect></svg> Results to Plots</p><p class="p-s"><svg viewBox="0 0 24 24" fill="none" xmlns="http://www.w3.org/2000/svg"><path fill-rule="evenodd" clip-rule="evenodd" d="M10.937 1.29117C11.2586 1.10116 11.6253 1.00006 12 1.00005C12.3748 1.00005 12.7415 1.10113 13.0631 1.29113L13.0653 1.29246L16.9543 3.57285C17.2759 3.7634 17.5399 4.03548 17.7222 4.35926C17.9045 4.68288 17.9997 5.04808 18.0001 5.41848L18.0002 9.98042C18.0001 10.068 17.9947 10.1554 17.9841 10.242C18.0062 10.2536 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13.0045 18.7311 13.0131 18.7458C13.0216 18.7604 13.0344 18.7737 13.0513 18.7835L13.0522 18.784L16.9411 20.9844C16.9585 20.9944 16.979 21 17.0004 21C17.0218 21 17.0422 20.9944 17.0596 20.9844L17.0635 20.9822L20.9485 18.7839L20.9494 18.7834C20.9662 18.7735 20.9791 18.7602 20.9876 18.7457C20.9961 18.731 21.0003 18.7152 21.0003 18.6996L21.0003 14.3005C21.0002 14.2849 20.996 14.2688 20.9875 14.2541C20.979 14.2396 20.9662 14.2263 20.9493 14.2164L20.9484 14.2159L17.0595 12.0155C17.0421 12.0056 17.0216 12 17.0002 12C16.9788 12 16.9584 12.0056 16.941 12.0155L16.9371 12.0177L13.0512 14.2166C13.0344 14.2264 13.0215 14.2397 13.013 14.2543C13.0045 14.2689 13.0003 14.2848 13.0003 14.3004L13.0003 18.6997ZM12.0001 3.00005C11.9856 3.00005 11.9699 3.00386 11.9542 3.01315L11.9504 3.01545L8.06449 5.29423C8.04891 5.30367 8.03294 5.31895 8.02054 5.34097C8.00784 5.36351 8.00018 5.39098 8.00011 5.42039L8.00019 9.97986C8.00026 10.0093 8.00793 10.0367 8.02062 10.0593C8.03303 10.0813 8.04899 10.0966 8.06457 10.106L8.06548 10.1066L11.9544 12.3869C11.9701 12.3962 11.9858 12.4001 12.0002 12.4001C12.0147 12.4001 12.0304 12.3962 12.0461 12.387L12.0499 12.3847L15.9349 10.1064L15.9358 10.1059C15.9514 10.0964 15.9674 10.0812 15.9798 10.0591C15.9924 10.0366 16.0001 10.0092 16.0002 9.97988L16.0001 5.42051C16 5.39117 15.9923 5.36333 15.9797 5.34083C15.9673 5.31882 15.9513 5.30354 15.9357 5.2941L15.9348 5.29355L12.0459 3.01316C12.0302 3.00387 12.0145 3.00005 12.0001 3.00005Z" fill="currentcolor"></path></svg> Downstream analyses in Pods</p><p class="p-s"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-hard-drive"><line x1="22" x2="2" y1="12" y2="12"></line><path d="M5.45 5.11 2 12v6a2 2 0 0 0 2 2h16a2 2 0 0 0 2-2v-6l-3.45-6.89A2 2 0 0 0 16.76 4H7.24a2 2 0 0 0-1.79 1.11z"></path><line x1="6" x2="6.01" y1="16" y2="16"></line><line x1="10" x2="10.01" y1="16" y2="16"></line></svg> Native visualizations (FastQC, CELLxGENE) for common files</p></div></div><div class="page_sectionGraphic__hVPOT"><video preload="none" poster="/_next/static/media/plots-differential-gene-expression-placeholder.6869384f.png" placeholder="/_next/static/media/plots-differential-gene-expression-placeholder.6869384f.png" loop="" muted="" playsInline="" class="page_image__kRnV_"><source src="/_next/static/videos/plots-differential-gene-expression-e2151608e334fdcd571323e5911ba629.mp4" type="video/mp4"/></video></div></div></div><div class="container_container__7U8A5 page_sectionPadding__sBsKl"><div><div class="page_sectionHeader__CGuvh"><h2 class="h4 regular">How it works</h2></div><div class="page_codeHowTo__R5Ynj"><div class="page_timeLineContainer__dsiQn"><div class="page_timeLine__NWMb7"></div><div class="page_headerBody__bJj8t text-block"><h2 class="h5 regular color-light">Upload your own</h2></div></div><div class="page_timeLineContainer__dsiQn"><div class="page_timeLine__NWMb7"><div class="page_number__csUZE page_step1__hw_nt">1</div><div class="page_line__2mGD9"></div></div><div class="page_body__5RzoK"><div class="page_textBlock___XMTX text-block"><h3 class="h5 regular">Install Latch & Clone your Nextflow repository</h3><div class="page_codeCell__cT4_M"><code><span class="page_codeRow__R8JHl"><span class="color-xLight">$</span><span class="color-dark">pip install latch</span></span><span class="page_codeRow__R8JHl"><span class="color-xLight">$</span><span class="color-dark">git clone https://github.com/nf-core/rnaseq</span></span><span class="page_codeRow__R8JHl"><span class="color-xLight">$</span><span class="color-dark">cd rnaseq</span></span></code></div></div></div></div><div class="page_timeLineContainer__dsiQn"><div class="page_timeLine__NWMb7"><div class="page_number__csUZE page_step1__hw_nt">2</div><div class="page_line__2mGD9"></div></div><div class="page_body__5RzoK"><div class="page_textBlock___XMTX text-block"><h3 class="h5 regular">Define metadata and workflow graphical interface</h3><div class="page_codeCellOuputs__bffFG"><div class="page_codeCell__cT4_M"><code><span class="page_codeRow__R8JHl"><span class="color-xLight">$</span><span class="color-dark">latch generate-metadata nextflow_schema.json --nextflow</span></span></code></div><div class="page_codeOutputs__fyHN1"><p class="p-xs color-light">Metadata files:</p><p class="page_iconTextRow__GKQhw p-s color-dark"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-file-code"><path d="M10 12.5 8 15l2 2.5"></path><path d="m14 12.5 2 2.5-2 2.5"></path><path d="M14 2v4a2 2 0 0 0 2 2h4"></path><path d="M15 2H6a2 2 0 0 0-2 2v16a2 2 0 0 0 2 2h12a2 2 0 0 0 2-2V7z"></path></svg> latch_metadata/__init__.py</p><p class="page_iconTextRow__GKQhw p-s color-dark"><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-file-code"><path d="M10 12.5 8 15l2 2.5"></path><path d="m14 12.5 2 2.5-2 2.5"></path><path d="M14 2v4a2 2 0 0 0 2 2h4"></path><path d="M15 2H6a2 2 0 0 0-2 2v16a2 2 0 0 0 2 2h12a2 2 0 0 0 2-2V7z"></path></svg> latch_metadata/parameters.py</p></div></div></div></div></div><div class="page_timeLineContainer__dsiQn"><div class="page_timeLine__NWMb7"><div class="page_number__csUZE page_step1__hw_nt">3</div></div><div class="page_body__5RzoK"><div class="page_textBlock___XMTX text-block"><h3 class="h5 regular">Register the workflow to Latch</h3><div class="page_codeCell__cT4_M"><code><span class="page_codeRow__R8JHl"><span class="color-xLight">$</span><span class="color-dark">latch login</span></span><span class="page_codeRow__R8JHl"><span class="color-xLight">$</span><span class="color-dark">latch register . --nf-script main.nf --nf-execution-profile docker</span></span></code></div></div><div class="page_textBlock___XMTX text-block"><p class="h5 regular">– and that’s it. You just uploaded the nf-core/rnaseq pipeline to Latch!</p><div class="page_buttonRow__nglRO"><a type="button" class="bold button_md__WVu1z button_ghost__G0U2J button_btn__DjQft" href="https://wiki.latch.bio/workflows/sdk/nextflow/overview" rel="noopener"><span class="button_glow__U5paJ" style="left:0px;top:0px"></span><span class="button_btnContent__oxNmH">Documentation <div class="button_arrow__2z32B"><svg viewBox="0 0 24 24" fill="none" xmlns="http://www.w3.org/2000/svg" class="icon"><g style="transform:rotate(0deg);transform-origin:center"><path d="M5 12H19" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"></path><path d="M12 5L19 12L12 19" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"></path></g></svg></div></span></a></div></div></div></div></div></div><div><div class="page_timeLineContainer__dsiQn"><div class="page_timeLine__NWMb7 page_hiddenSm__7FsZK"></div><div class="page_textBlock___XMTX text-block"><h3 class="h5 regular">Or access the nf-core library on Latch</h3></div></div><div class="page_nfCoreGrid__FNX_8"><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/rnaseq icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-rna-seq-icon.dcf31f68.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>rnaseq</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/sarek icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-sarek-icon.03a096a0.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>sarek</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/scrnaseq icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-scrnaseq-icon.f138abf0.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>scrnaseq</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/methylseq icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-methylseq-icon.9bd3a39a.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>methylseq</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/mag icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-mag-icon.bb5b21a9.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>mag</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/atacseq icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-atac-seq-icon.92acb2b2.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>atacseq</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/nanoseq icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-nano-seq-icon.cca2fc35.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>nanoseq</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/ampliseq icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-ampliseq-icon.95c03ea9.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>ampliseqs</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/cutandrun icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-cut-and-run-icon.366c77c5.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>cutandrun</p></div><div class="page_nfCoreItem__ay5pf"><img alt="nf-core/bacass icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-bacass-icon.2027e47c.svg"/><p class="h5 color-dark regular"><span class="color-light">nf-core/</span>bacass</p></div></div><div class="page_timeLineContainer__dsiQn"><div class="page_timeLine__NWMb7 page_hiddenSm__7FsZK"></div><div class="page_body__5RzoK"><div class="page_textBlock___XMTX text-block"><p class="p-md regular">Each pipeline on Latch has a user-friendly interface, a graphical, error-validated sample sheet component to fill out pipeline inputs, and a directed acyclic graph (DAG) to view process and sample-specific errors.</p><br/><p class="p-md regular">For Bulk RNA-seq, ATAC-seq, and Methyl-seq, Latch also offers interactive plotting dashboards that directly ingest NF-core outputs and produce publication-ready figures.</p></div><div class="page_buttonRow__nglRO"><div><div class="requestDemoForm_inlineForm__WV3Xi"><button type="button" class="bold button_md__WVu1z button_normal__dQOO7 button_btn__DjQft" rel="noopener"><span class="button_glow__U5paJ" style="left:0px;top:0px"></span><span class="button_btnContent__oxNmH">Request support for your nf-core pipeline <div class="button_arrow__2z32B"><svg viewBox="0 0 24 24" fill="none" xmlns="http://www.w3.org/2000/svg" class="icon"><g style="transform:rotate(0deg);transform-origin:center"><path d="M5 12H19" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"></path><path d="M12 5L19 12L12 19" stroke="currentcolor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round"></path></g></svg></div></span></button></div></div></div></div></div></div></div><div class="container_container__7U8A5 page_sectionPadding__sBsKl"><div class="page_sectionHeader__CGuvh"><h2 class="h4 regular">Features</h2></div><div class="page_featureGrid__rF6fK"><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="gauge icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/gauge.e8b9383d.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Performance Optimization</h4><p class="p-s">Easily view and compare results, cost, and performance of different executions</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="layout icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/layout.76ace924.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Graphical workflow interface</h4><p class="p-s">Easily view and compare results, cost, and performance of different executions</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="library arrow icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/library-arrow.92ce432f.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Integration with Latch Registry</h4><p class="p-s">Developers can extend their existing Nextflow workflow to read from Latch Registry, a user-friendly, error-validated sample sheet input system.</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="arrow in terminal icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/arrow-in-terminal.9210dff4.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Debugging</h4><p class="p-s">Avoid failed workflows caused by discrepancies between running code locally and in the cloud.</p><p class="p-s">Latch SDK comes with the latch develop command, which drops you into an interactive shell where you can run your code and inspect the environment before registering and executing the entire workflow in the cloud to debug environments and logical issues.</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="circle arrow x icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/circle-arrow-x.42496c48.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Relaunching from failed tasks</h4><p class="p-s">Nextflow's integration uses caching to save intermediate workflow results, allowing for relaunch without full re-execution.</p><p class="p-s">Latch also exposes storage expiration hours as a configurable parameter to users to determine how long the cache will persist after a failure. </p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="logging icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/logging.f96249c1.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Logging</h4><p class="p-s">To facilitate debugging, a DAG of processes is generated in the Latch console to enable developers to easily track progress, view logs, and analyze cost and runtime of each process execution.</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="efs icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/efs.eae5afd9.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">EFS integration</h4><p class="p-s">Intermediate outputs are communicated between processes via AWS EFS and published outputs can be uploaded directly to Latch Data via a custom filesystem plugin. The work directory is automatically cleaned up after workflow completion, saving costs and eliminating the hassle of manually cleaning up resources</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="efs icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/nf-core-pipeline.70df46d9.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Ready-to-use NF-core pipelines</h4><p class="p-s">Latch has top 10 ready-to-launch NF-core workflows with user-friendly interfaces, documentation, and GitHub repositories to help you get started.</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="person plus icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/person-plus.e645ee90.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Sharing of pipelines</h4><p class="p-s">There’s no seat limit on Latch. Everyone with a Latch account can create any number of workspaces and add unlimited team members to each workspace. As an Admin, user can also distribute versions of their Nextflow pipelines to multiple workspaces.</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="boxes icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/boxes.a18cf6d3.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Private registries</h4><p class="p-s">Latch Secrets allow Nextflow processes on Latch to securely use containers images hosted in users’ private registries (GitLab, AWS ECR, Azure container registry, and more)</p></div></div><div class="page_featureGridItem__MvVI0"><div class="page_featureIcon__LpP0L"><img alt="github icon" loading="lazy" width="32" height="32" decoding="async" data-nimg="1" style="color:transparent" src="/_next/static/media/github.2a2f9ee7.svg"/></div><div class="page_featureDescription__o9gmN"><h4 class="p-md regular color-dark">Integration with GitHub</h4><p class="p-s">Workflows on Latch can be versioned using Git. If the SDK detects that the project directory is a Git repository, it will append the first six digits of the latest commit hash to the workflow version.</p></div></div></div></div><div class="container_container__7U8A5"><div class="page_sectionHeader__CGuvh"></div></div><div class="container_container__7U8A5 page_cta__0t4dX"><div class="page_pricing__7orIV"><h2 class="h4 regular">Pay-as-you-go. No commitment upfront.</h2><div><svg width="640" height="291" viewBox="0 0 640 291" fill="none" xmlns="http://www.w3.org/2000/svg"><rect y="256" width="640" height="0.5" fill="white" fill-opacity="0.24"></rect><text fill="#DFE1E6" font-size="12" letter-spacing="-0.02em"><tspan x="505" y="46.8636">Licensing Costs</tspan></text><text fill="#DFE1E6" font-size="12" letter-spacing="-0.02em"><tspan x="505" y="73.8636">Usage Costs</tspan></text><text fill="#DFE1E6" font-size="14" letter-spacing="-0.02em"><tspan x="355" y="287.091">LatchBio</tspan></text><rect x="343.5" y="176.5" width="80" height="65" rx="2.5" fill="#DFE1E6" stroke="#C1C7D0"></rect><text fill="#DFE1E6" letter-spacing="-0.02em" font-size="14"><tspan x="150" y="287.091">Legacy Solution</tspan></text><g opacity="0.9"><rect x="160" width="81" height="186" rx="3" fill="#DA615C"></rect><rect x="160.5" y="0.5" width="80" height="185" rx="2.5" stroke="white" stroke-opacity="0.16"></rect></g><rect x="160.5" y="190.5" width="80" height="51" rx="2.5" fill="#DFE1E6" stroke="#C1C7D0"></rect><rect x="487" y="39" width="8" height="8" rx="3" fill="#DA615C"></rect><rect x="487" y="66" width="8" height="8" rx="3" fill="#FAFBFC"></rect></svg></div><p class="p-md">There’s no license fee on Latch. You can add unlimited number of users on the platform, and only pay for compute and storage. </p><a class="p-md" href="/pricing">Learn More →</a></div><div class="requestTrialBanner_container__LUVGK"><p class="h4">7-Day Free Trial</p><p class="p-md">Access the leading data platform for biology.</p><ul class="list-no-bullet list p-s requestTrialBanner_list__LHfd9"><li><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-circle-check"><circle cx="12" cy="12" r="10"></circle><path d="m9 12 2 2 4-4"></path></svg> A scoping call to map out your scientific workflows</li><li><svg xmlns="http://www.w3.org/2000/svg" width="24" height="24" viewBox="0 0 24 24" fill="none" stroke="currentColor" stroke-width="2" stroke-linecap="round" stroke-linejoin="round" class="lucide lucide-circle-check"><circle cx="12" cy="12" r="10"></circle><path d="m9 12 2 2 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