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KEGG T03863: MSSAC_3373
<!doctype html> <html><head> <title>KEGG T03863: MSSAC_3373</title> <link type="text/css" rel="stylesheet" href="/css/gn2.css?1742898977"> <link type="text/css" rel="stylesheet" href="/css/bget.css?1742898977"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> <link type="text/css" rel="stylesheet" href="/css/bgetm.css?1742898977" media="only screen and (max-width: 768px)"> <style>.kcfd{display:none;}</style> <script> <!-- var getElementsByClassName = document.getElementsByClassName ? function (cl){ return document.getElementsByClassName(cl); } : function (cl){ var elms = []; var objs = document.getElementsByTagName('*'); for(var i=0;i<objs.length;i++){ var obj = objs[i]; if(obj.className == cl){ elms.push(obj); } } return elms; }; function toggleField(clk,cl,show,hide){ var objs = getElementsByClassName(cl); for(var i=0;i<objs.length;i++){ var obj = objs[i]; if(!obj.style.display||obj.style.display == 'none'){ obj.style.display = 'block'; clk.innerHTML = ' « '+hide; 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} } } function Link_XtrctSeq2(form) { var dna_from; var dna_to; var dna_len; var plus_up = Number(form.XtrctSeq_UP.value) ; var plus_down = Number(form.XtrctSeq_DOWN.value); var vector = Number(form.VECTOR.value); var org = form.ORG.value; var chr = form.CHR.value; var kid = form.KEGGID.value; var url; if (plus_up == 0 && plus_down == 0) { url = "/entry/-f+-n+n+" + kid; } else { if (vector == 1) { dna_from = Number(form.FROM.value) - plus_up; dna_to = Number(form.TO.value) + plus_down; } else { dna_from = Number(form.FROM.value) - plus_down; dna_to = Number(form.TO.value) + plus_up; } url = "/dbget-bin/cut_sequence_genes.pl?FROM=" + dna_from + "&TO=" + dna_to +"&VECTOR=" + vector + "&ORG=" + org; if (chr) url += "&CHR=" + chr; } //window.open( url, "_self" ); location.href = url; } function go_taxonomy(form,params){ for(var key in params){ if(form[key]){ form.setAttribute(key,params[key]); } else{ var obj = document.createElement('input'); obj.setAttribute('type','hidden'); obj.setAttribute('name',key); obj.setAttribute('value',params[key]); form.appendChild(obj); } } form.submit(); } window.onload=function(){window.focus();init();}; //---> </script> </head> <body> <div> <table border=0 cellpadding=0 cellspacing=0><tr><td> <table border=0 cellpadding=0 cellspacing=0 width="650"><tr><td width=70><a href="/kegg/kegg2.html"><img align="middle" alt="KEGG" border=0 src="/Fig/bget/kegg1.gif"></a></td><td> </td><td><a name="msj:MSSAC_3373"></a><font class="title1">Methanosarcina siciliae C2J: MSSAC_3373</font></td><td class="tar vbot"><button class="btn" onclick="javascript:void(window.open('/kegg/document/help_bget_genes.html','KEGG_Help','toolbar=no,location=no,directories=no,width=720,height=640,resizable=yes,scrollbars=yes'));return false;">Help</button></td></tr></table><form method="post" action="javascript:Link_XtrctSeq2(document.form1);" enctype="application/x-www-form-urlencoded" id="form1" name="form1"><input type="hidden" name="ACCESSION" value="MSSAC_3373" > <input type="hidden" name="KEGGID" value="msj:MSSAC_3373" > <input type="hidden" name="ORG" value="msj" > <input type="hidden" name="FROM" value="4161286" > <input type="hidden" name="TO" value="4162011" > <input type="hidden" name="VECTOR" value="1" > <input type="hidden" name="CHR" value="" > <input type="hidden" name="source" value="OPEN" > <input type="hidden" name="pos" value="4161286..4162011" > </form><table class="w1" width="650"> <tr> <td class="fr1 w1"> <table width="650" class="w2"> <tr><th class="th10 deft tal vmid"><span class="nowrap">Entry</span></th> <td class="td10 defd"><table class="w1" width="100%"><tr><td class="tal pd0"><code><span class="nowrap">MSSAC_3373 CDS <a href="/kegg-bin/show_organism?org=T03863">T03863</a> <br> </span></code></td></tr></table></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Name</span></th> <td class="td11 defd"><div class="cel"><div class="cel">(GenBank) CoB--CoM heterodisulfide reductase subunit C<br> </div></div></td></tr> <tr><th class="th10 rept tal vtop"><span class="nowrap"> KO</span></th> <td class="td10 repd"><div class="cel"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/entry/K22482">K22482</a> </span></td><td>heterodisulfide reductase subunit C1 [EC:<a href="/entry/1.8.7.3">1.8.7.3</a>]</td></tr></table></div></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Organism</span></th> <td class="td11 defd"><div class="cel"><a href="/kegg-bin/show_organism?org=msj">msj</a> Methanosarcina siciliae C2J<br> </div></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Pathway</span></th> <td class="td10 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/msj00680+MSSAC_3373">msj00680</a> </span></td><td>Methane metabolism</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/msj01100+MSSAC_3373">msj01100</a> </span></td><td>Metabolic pathways</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/msj01120+MSSAC_3373">msj01120</a> </span></td><td>Microbial metabolism in diverse environments</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/pathway/msj01200+MSSAC_3373">msj01200</a> </span></td><td>Carbon metabolism</td></tr></table></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Module</span></th> <td class="td11 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/module/msj_M00356+MSSAC_3373">msj_M00356</a> </span></td><td>Methanogenesis, methanol => methane</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/module/msj_M00357+MSSAC_3373">msj_M00357</a> </span></td><td>Methanogenesis, acetate => methane</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/module/msj_M00563+MSSAC_3373">msj_M00563</a> </span></td><td>Methanogenesis, methylamine/dimethylamine/trimethylamine => methane</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/module/msj_M00567+MSSAC_3373">msj_M00567</a> </span></td><td>Methanogenesis, CO2 => methane</td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap"><a href="/module/msj_M00617+MSSAC_3373">msj_M00617</a> </span></td><td>Methanogen</td></tr></table></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Brite</span></th> <td class="td10 defd"><div class="cel"><span class="nowrap">KEGG Orthology (KO) [BR:<a href="/brite/msj00001+MSSAC_3373">msj00001</a>]<br> 09100 Metabolism<br> 09102 Energy metabolism<br> 00680 Methane metabolism<br> MSSAC_3373<br> Enzymes [BR:<a href="/brite/msj01000+MSSAC_3373">msj01000</a>]<br> 1. Oxidoreductases<br> 1.8 Acting on a sulfur group of donors<br> 1.8.7 With an iron-sulfur protein as acceptor<br> 1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase<br> MSSAC_3373<br> </span></div><button class="btn" onclick="location.href='/kegg-bin/search_brite?option=-a&search_string=MSSAC_3373&prefix=msj';return false;">BRITE hierarchy</button></td></tr> <tr><th class="th11 deft tal vmid"><span class="nowrap">SSDB</span></th> <td class="td11 defd"><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_best?org_gene=msj:MSSAC_3373';return false;">Ortholog</button><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_paralog?org_gene=msj:MSSAC_3373';return false;">Paralog</button><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_gclust?org_gene=msj:MSSAC_3373';return false;">Gene cluster</button><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/www_ssget?msj:MSSAC_3373';return false;">GFIT</button></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">Motif</span></th> <td class="td10 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap">Pfam: </span></td><td><a href="https://www.genome.jp/entry/pf:Fer4_8">Fer4_8</a> <a href="https://www.genome.jp/entry/pf:Fer4_9">Fer4_9</a> <a href="https://www.genome.jp/entry/pf:Fer4_10">Fer4_10</a> <a href="https://www.genome.jp/entry/pf:Fer4_17">Fer4_17</a> <a href="https://www.genome.jp/entry/pf:Fer4_7">Fer4_7</a> <a href="https://www.genome.jp/entry/pf:Fer4_2">Fer4_2</a> <a href="https://www.genome.jp/entry/pf:Fer4_4">Fer4_4</a> <a href="https://www.genome.jp/entry/pf:Fer4_16">Fer4_16</a> <a href="https://www.genome.jp/entry/pf:Fer4_6">Fer4_6</a> <a href="https://www.genome.jp/entry/pf:Fer4">Fer4</a> <a href="https://www.genome.jp/entry/pf:Fer4_22">Fer4_22</a> <a href="https://www.genome.jp/entry/pf:Fer4_3">Fer4_3</a></td></tr></table><button class="btn" onclick="location.href='https://www.kegg.jp/ssdb-bin/ssdb_motif?kid=msj:MSSAC_3373';return false;">Motif</button></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Other DBs</span></th> <td class="td11 defd"><table class="w1"><tr><td class="vtop pd0"><span class="nowrap">NCBI-ProteinID: </span></td><td><a href="https://www.ncbi.nlm.nih.gov/protein/AKB37963">AKB37963</a></td></tr></table><table class="w1"><tr><td class="vtop pd0"><span class="nowrap">UniProt: </span></td><td><a href="https://www.uniprot.org/uniprot/A0A0E3PRD4">A0A0E3PRD4</a></td></tr></table></td></tr> <tr><th class="th10 deft tal vmid"><span class="nowrap">LinkDB</span></th> <td class="td10 defd"><button class="btn" onclick="location.href='https://www.genome.jp/dbget-bin/get_linkdb?msj+MSSAC_3373';return false;">All DBs</button></td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">Position</span></th> <td class="td11 defd"><div class="cel">4161286..4162011<br> </div><button class="btn" onclick="window.open('/genome/msj+MSSAC_3373','_blank');return false;">Genome browser</button></td></tr> <tr><th class="th10 deft tal vtop"><span class="nowrap">AA seq</span></th> <td class="td10 defd">241 aa <button class="btn" onclick="location.href='/entry/-f+-n+a+msj:MSSAC_3373';return false;">AA seq</button><button class="btn" onclick="location.href='https://www.genome.jp/tools-bin/search_sequence?prog=blast&seqid=msj:MSSAC_3373+aa';return false;">DB search</button><br> MMPYVNKYDTPECKTLAETAKKSIRTPESLGLDRCIQCGACTASCPAARFTDYSPRQIVK<br> KVLENDRSVLESEMIWSCFYCYSCNLRCPRNNSPVTIVQVLRQMAINEGIGVEKLAYFLE<br> IGEHLGENGASKVPGAGIKNMERDLGERWIGIKGSLEPIRSKLGLSARDVRNTHGEVQAI<br> LESTGYFEREKWIKARVQEKRIHGFMKTDRTGTACTENKKNSGDFGFESDSEYPGQEALT<br> V</td></tr> <tr><th class="th11 deft tal vtop"><span class="nowrap">NT seq</span></th> <td class="td11 defd">726 nt <button class="btn" form="form1">NT seq</button><code> +upstream<input type="text" name="XtrctSeq_UP" value="0" size="3" form="form1">nt +downstream<input type="text" name="XtrctSeq_DOWN" value="0" size="3" form="form1">nt</code><br> atgatgccatatgtaaacaaatacgataccccggagtgtaagactcttgcagagaccgca<br> aagaaaagtatccgaacccctgaatccctcggactggaccgctgtatccagtgcggagcc<br> tgcactgcttcctgccctgcagcccggtttactgactacagcccgcggcagatcgtaaaa<br> aaagtgctcgaaaatgaccgcagtgtccttgagtccgaaatgatctggtcctgcttctac<br> tgctattcctgcaatttgcgctgccccaggaacaacagccctgtaacaatcgtgcaggtg<br> ctgcggcagatggctatcaacgaaggaataggggttgaaaagcttgcctatttccttgag<br> atcggagagcacctcggagaaaacggagcaagcaaggtcccgggcgccggcatcaaaaac<br> atggaaagagaccttggagagcgctggatcggaattaaagggagccttgagccaatccgt<br> tccaaacttgggctcagtgccagggatgtaaggaacacccatggagaggtccaggctatt<br> cttgaaagcacgggatatttcgaaagggaaaagtggattaaagcaagggtccaggaaaaa<br> agaatccacgggtttatgaagacggaccgcacagggacagcctgcactgaaaacaagaaa<br> aacagcggagacttcggctttgaaagcgatagcgagtatcccggacaggaagctcttact<br> gtttaa</td></tr> </table></td></tr></table> <br></td></tr></table> <a href="/dbget/">DBGET</a> integrated database retrieval system</div> </body> </html>