CINXE.COM
Timothy Hughes | Donnelly Centre for Cellular and Biomolecular Research
<!DOCTYPE html> <html lang="en" dir="ltr" prefix="content: http://purl.org/rss/1.0/modules/content/ dc: http://purl.org/dc/terms/ foaf: http://xmlns.com/foaf/0.1/ og: http://ogp.me/ns# rdfs: http://www.w3.org/2000/01/rdf-schema# schema: http://schema.org/ sioc: http://rdfs.org/sioc/ns# sioct: http://rdfs.org/sioc/types# skos: http://www.w3.org/2004/02/skos/core# xsd: http://www.w3.org/2001/XMLSchema# " > <head> <meta charset="utf-8" /> <script async src="https://www.googletagmanager.com/gtag/js?id=UA-34496632-11"></script> <script>window.dataLayer = window.dataLayer || [];function gtag(){dataLayer.push(arguments)};gtag("js", new Date());gtag("set", "developer_id.dMDhkMT", true);gtag("config", "UA-34496632-11", {"groups":"default","anonymize_ip":true,"page_placeholder":"PLACEHOLDER_page_path","allow_ad_personalization_signals":false});gtag("config", " G-M7KC4MMZQB", {"groups":"default","page_placeholder":"PLACEHOLDER_page_location","allow_ad_personalization_signals":false});</script> <link rel="canonical" href="https://thedonnellycentre.utoronto.ca/faculty/timothy-hughes" /> <meta property="og:type" content="faculty_member" /> <meta property="og:url" content="https://thedonnellycentre.utoronto.ca/faculty/timothy-hughes" /> <meta property="og:title" content="Timothy Hughes" /> <meta name="twitter:card" content="summary_large_image" /> <meta name="twitter:title" content="Timothy Hughes" /> <meta name="twitter:site" content="@uoftmedicine" /> <meta name="twitter:url" content="https://thedonnellycentre.utoronto.ca/faculty/timothy-hughes" /> <meta name="Generator" content="Drupal 10 (https://www.drupal.org)" /> <meta name="MobileOptimized" content="width" /> <meta name="HandheldFriendly" content="true" /> <meta name="viewport" content="width=device-width, initial-scale=1.0" /> <link rel="icon" href="/themes/webpac/favicon.ico" type="image/vnd.microsoft.icon" /> <script src="/sites/default/files/google_tag/w2_donnelly_container/google_tag.script.js?sraecr" defer></script> <title>Timothy Hughes | Donnelly Centre for Cellular and Biomolecular Research</title> <link rel="stylesheet" media="all" href="/sites/default/files/css/css_RwKjtqiuL4Z-xSyWjXRnARcvmUx010Gn2HAQibxjHGQ.css?delta=0&language=en&theme=webpac&include=eJw9zEEOgCAMBMAPEXkSKXXRJrQQW2L8vZ68zWmY-ETry8_MPzeFrcTLY2ihXcWykljAyBjFRgjDkz8e0FzJkW7USZyPPir11KQHrm-cIcNevwonHA" /> <link rel="stylesheet" media="all" href="/sites/default/files/css/css_HR8sME4VI-krB8znf5PNnjL-plCWxytGSr1f1afG6yg.css?delta=1&language=en&theme=webpac&include=eJw9zEEOgCAMBMAPEXkSKXXRJrQQW2L8vZ68zWmY-ETry8_MPzeFrcTLY2ihXcWykljAyBjFRgjDkz8e0FzJkW7USZyPPir11KQHrm-cIcNevwonHA" /> <script src="/libraries/fontawesome/js/fontawesome.min.js?v=6.4.0" defer></script> <script src="/libraries/fontawesome/js/solid.min.js?v=6.4.0" defer></script> <script src="/libraries/fontawesome/js/brands.min.js?v=6.4.0" defer></script> </head> <body id="page" class="l-page"> <nav><a href="#main-content" class="u-visually--hidden focusable"> Skip to main content </a></nav> <noscript><iframe src="https://www.googletagmanager.com/ns.html?id=GTM-5VF4L8V" height="0" width="0" style="display:none;visibility:hidden"></iframe></noscript> <div class="dialog-off-canvas-main-canvas" data-off-canvas-main-canvas> <header class="l-page__header"> <div class="o-header"> <div class="o-header__top"> <div class="o-header__top-contain"> <a class="o-header__parent-site-link " href="https://temertymedicine.utoronto.ca"> <svg class="o-header__parent-site-link__svg" xmlns="http://www.w3.org/2000/svg" width="8" height="12" viewBox="0 0 8 12"> <polygon points="7.2 1.426 2.89 5.801 7.2 10.241 5.871 11.667 .2 5.801 5.871 0"/> </svg> Temerty Faculty of Medicine </a> <div class="o-header__shortcuts"> <nav role="navigation" aria-labelledby="block-header-shortcuts-menu" id="block-header-shortcuts"> <h2 class="visually-hidden" id="block-header-shortcuts-menu">Header Shortcuts</h2> <ul class="m-menu-header-shortcuts"> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/contacts.htm" class="m-menu-header-shortcuts__link">Emergency</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/campuses/maps.htm" class="m-menu-header-shortcuts__link">Maps</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/" class="m-menu-header-shortcuts__link">U of T Main</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/a-z.htm" class="m-menu-header-shortcuts__link">A-Z Directory</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="/contact-us" class="m-menu-header-shortcuts__link" data-drupal-link-system-path="node/311">Contact</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="https://engage.utoronto.ca/site/SPageServer?pagename=donate#/collection/53" class="m-menu-header-shortcuts__link">Donate</a> </li> </ul> </nav> </div> <div class="o-header__search"> <a href="/search" class="a-btn-icon--sml " > <div class="a-btn-icon__icon"> <div class="a-icon--inline"> <i class="fas fa-search" data-fa-transform="" data-fa-mask="" ></i> <span class="u-visually--hidden">Search this site</span> </div> </div> </a> </div> </div> </div> <div class="o-header__bottom"> <style> .o-header__logo { width: var(--logo-width); height: var(--logo-height); } </style> <div class="o-header__logo" style="--logo-width: 375px; --logo-height: auto;"> <div class="o-header__logo-wrapper"> <a class="m-logo--image" href="/" > <img class="m-logo--image__img" src="/sites/default/files/assets/logo/DonnellyLogo.png" alt="Donnelly Centre for Cellular and Biomolecular Research Home" > </a> </div> </div> <div class="o-header__mobile-btn"> <a href="#menu-mobile" id="toggle-icon" class="0--icon-sml " > <div class="a-icon--sml"> <i class="fas fa-bars" data-fa-transform="" data-fa-mask="" ></i> <span class="u-visually--hidden">Menu</span> </div> </a> </div> </div> <div class="o-header__menu-main-wrapper"> <div class="o-header__menu-main"> <nav role="navigation" aria-labelledby="menu-main-menu" id="menu-main" data-menu-main="" class="m-menu-main"> <h2 class="visually-hidden" id="menu-main-menu">Main Menu</h2> <nav class="m-menu-main" aria-labelledby="main-nav" data-menu-main> <h2 class="u-visually--hidden" id="main-nav">Main navigation</h2> <ul class="m-menu-main__list--level-1" data-dropdown-menu role="menu"> <li class="m-menu-main__item--level-1 is-active" aria-current="page" role="menuitem"> <a href="/our-scientists" class="m-menu-main__link--level-1" data-toggle="panel-id-4cff8143-1fe6-461d-a267-7928bf4e9044" target="_self" data-drupal-link-system-path="node/398">Our Scientists</a> <div class="m-menu-main__panel" id="panel-id-4cff8143-1fe6-461d-a267-7928bf4e9044" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/faculty/brenda-andrews" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/236">Andrews, Brenda</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/stephane-angers" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/458">Angers, Stephane</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/liliana-attisano" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/240">Attisano, Liliana</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/artem-babaian" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/956">Babaian, Artem</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/gary-bader" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/235">Bader, Gary</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/benjamin-blencowe" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/241">Blencowe, Benjamin</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/charles-boone" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/239">Boone, Charles</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/grant-brown" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/242">Brown, Grant</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/warren-chan" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/244">Chan, Warren</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/andrew-fraser" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/238">Fraser, Andrew</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/james-friesen" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/267">Friesen, James (Professor Emeritus)</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/faculty/penney-gilbert" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/247">Gilbert, Penney</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/jesse-gillis" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/495">Gillis, Jesse</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/aleksandrina-goeva" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/1457">Goeva, Aleksandrina</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/jack-greenblatt" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/248">Greenblatt, Jack</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/timothy-hughes" title="" class="m-menu-main__link--level-2 is-active" data-drupal-link-system-path="node/233" aria-current="page">Hughes, Timothy</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/philip-m-kim" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/249">Kim, Philip M.</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/henry-krause" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/251">Krause, Henry</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/j-rafael-montenegro-burke" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/268">Montenegro Burke, Rafael (Rafa)</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/john-morris" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/1410">Morris, John</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/cindi-morshead" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/253">Morshead, Cindi</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/milica-radisic" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/1056">Radisic, Milica</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/hannes-rost" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/266">Röst, Hannes</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/faculty/frederick-roth" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/255">Roth, Frederick (Fritz)</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/peter-roy" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/237">Roy, Peter</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/william-ryu" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/256">Ryu, William</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/michael-sefton" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/257">Sefton, Michael</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/molly-shoichet" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/258">Shoichet, Molly</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/igor-stagljar" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/260">Stagljar, Igor</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/mikko-taipale" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/261">Taipale, Mikko</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/derek-van-der-kooy" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/250">van der Kooy, Derek</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/shu-wang" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/1346">Wang, Shu</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/aaron-wheeler" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/262">Wheeler, Aaron</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/christopher-yip" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/263">Yip, Christopher</a> </li> <li class="m-menu-main__item--level-2"> <a href="/faculty/zhaolei-zhang" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/265">Zhang, Zhaolei</a> </li> </ul> </div> </div> </div> </li> <li class="menu-firstchild m-menu-main__item--level-1" role="menuitem"> <a href="/our-research-0" class="m-menu-main__link--level-1" data-toggle="panel-id-8a720d4e-4157-4921-aaad-85f0773c5da2" target="_self">Research</a> <div class="m-menu-main__panel" id="panel-id-8a720d4e-4157-4921-aaad-85f0773c5da2" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/our-research-0" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/411">Our Research</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/pubmed" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/383">Publications (RSS feed)</a> </li> </ul> </div> </div> </div> </li> <li class="m-menu-main__item--level-1" role="menuitem"> <a href="/platforms" class="m-menu-main__link--level-1" data-toggle="panel-id-5632f555-87dc-4249-8cd4-9eb20af82d39" target="_self" data-drupal-link-system-path="node/402">Platforms</a> <div class="m-menu-main__panel" id="panel-id-5632f555-87dc-4249-8cd4-9eb20af82d39" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/accelerator-donnelly-collaboration" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/376">Accelerator for Donnelly Collaboration</a> </li> <li class="m-menu-main__item--level-2"> <a href="/donnelly-mass-spec-facility" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/364">Donnelly Mass Spec Facility</a> </li> </ul> </div> <div class="m-menu-main__col--2-split is-split"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/donnelly-sequencing-centre" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/307">Donnelly Sequencing Centre</a> <ul class="m-menu-main__list--level-3" data-main-menu-component="third-level-list"> <li class="m-menu-main__item--level-3"> <a href="/what-we-offer" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/365">What We Offer</a> </li> <li class="m-menu-main__item--level-3"> <a href="/getting-started" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/366">Getting Started</a> </li> <li class="m-menu-main__item--level-3"> <a href="/dsc-team" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/367">The DSC Team</a> </li> <li class="m-menu-main__item--level-3"> <a href="/selected-publications" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/368">Publications</a> </li> <li class="m-menu-main__item--level-3"> <a href="/academic-outreach" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/369">Academic Outreach</a> </li> <li class="m-menu-main__item--level-3"> <a href="/world-sequencing" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/371">The World of Sequencing</a> </li> </ul> </li> </ul> </div> </div> </div> </li> <li class="m-menu-main__item--level-1" role="menuitem"> <a href="/students" class="m-menu-main__link--level-1" data-toggle="panel-id-6e23f8a3-370d-4590-9de5-263641ef521c" target="_self" data-drupal-link-system-path="node/401">Students</a> <div class="m-menu-main__panel" id="panel-id-6e23f8a3-370d-4590-9de5-263641ef521c" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--1-split is-split"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/student-awards" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/294">Student Awards</a> <ul class="m-menu-main__list--level-3" data-main-menu-component="third-level-list"> <li class="m-menu-main__item--level-3"> <a href="/cecil-yip-doctoral-research-award" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/297">Cecil Yip Doctoral Research Award</a> </li> <li class="m-menu-main__item--level-3"> <a href="/donnelly-centre-research-thesis-prize" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/298">Donnelly Centre Research Thesis Prize</a> </li> <li class="m-menu-main__item--level-3"> <a href="/jennifer-comyn-graduate-award-cancer-research" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/1244">Jennifer Comyn Graduate Award for Cancer Research</a> </li> <li class="m-menu-main__item--level-3"> <a href="/jennifer-dorrington-graduate-research-award" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/296">Jennifer Dorrington Graduate Research Award</a> </li> </ul> </li> </ul> </div> <div class="m-menu-main__col--3"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/donnelly-centre-graduate-student-association" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/326">Donnelly Centre Graduate Student Association</a> </li> <li class="m-menu-main__item--level-2"> <a href="/summer-undergraduate-research-program" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/355">Summer Undergraduate Research Program</a> </li> </ul> </div> </div> </div> </li> <li class="m-menu-main__item--level-1" role="menuitem"> <a href="/postdocs" class="m-menu-main__link--level-1" data-toggle="panel-id-1e61f096-d39c-4ca8-ab30-be9aa290d6b7" target="_self" data-drupal-link-system-path="node/403">Postdocs</a> <div class="m-menu-main__panel" id="panel-id-1e61f096-d39c-4ca8-ab30-be9aa290d6b7" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/charles-h-best-postdoctoral-fellowship" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/295">Charles H. Best Postdoctoral Fellowship</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/donnelly-centre-home-fellowship" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/1353">Donnelly Centre Home Fellowship</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/donnelly-centre-research-excellence-award" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/356">Donnelly Centre Research Excellence Award</a> </li> </ul> </div> </div> </div> </li> <li class="menu-firstchild m-menu-main__item--level-1" role="menuitem"> <a href="/news" class="m-menu-main__link--level-1" data-toggle="panel-id-34d84ee5-3d4f-4534-a22d-e080da4d77c9" target="_self">News</a> <div class="m-menu-main__panel" id="panel-id-34d84ee5-3d4f-4534-a22d-e080da4d77c9" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/news" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/381">News</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/donnelly-centre-magazine" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/374">Donnelly Centre Magazine</a> </li> <li class="m-menu-main__item--level-2"> <a href="/annual-reports" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/400">Annual Reports</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/donnelly-media" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/316">Donnelly in the Media</a> <ul class="m-menu-main__list--level-3" data-main-menu-component="third-level-list"> <li class="m-menu-main__item--level-3"> <a href="/media-archive-2008-2020" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/426">In the Media Archive (2008-2020)</a> </li> </ul> </li> </ul> </div> </div> </div> </li> <li class="menu-firstchild m-menu-main__item--level-1" role="menuitem"> <a href="/current-opportunities" class="m-menu-main__link--level-1" data-toggle="panel-id-7fb1f7dd-f886-43c5-8fcc-0b45e53044a4" target="_self">Careers</a> <div class="m-menu-main__panel" id="panel-id-7fb1f7dd-f886-43c5-8fcc-0b45e53044a4" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/current-opportunities" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/283">Current Opportunities</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/working-and-living-toronto" title="" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/299">Working and Living in Toronto</a> </li> </ul> </div> </div> </div> </li> <li class="m-menu-main__item--level-1" role="menuitem"> <a href="/events" class="m-menu-main__link--level-1" data-toggle="panel-id-4b4b688a-2197-48a8-a290-e9661bfaf496" target="_self" data-drupal-link-system-path="node/1249">Events</a> <div class="m-menu-main__panel" id="panel-id-4b4b688a-2197-48a8-a290-e9661bfaf496" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/events" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/1249">Events</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/postdoctoral-fellow-and-research-associate-seminars" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/323">Postdoctoral Fellow and Research Associate Seminars</a> </li> </ul> </div> </div> </div> </li> <li class="menu-firstchild m-menu-main__item--level-1" role="menuitem"> <a href="/welcome-director" class="m-menu-main__link--level-1" data-toggle="panel-id-3fc7b65c-6bbe-4949-95b8-ff98c92c665f" target="_self">About Us</a> <div class="m-menu-main__panel" id="panel-id-3fc7b65c-6bbe-4949-95b8-ff98c92c665f" data-dropdown data-close-on-click="true" data-hover="true" data-hover-pane="true"> <div class="m-menu-main__cols--3"> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/welcome-director" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/455">Director's Welcome Message</a> </li> <li class="m-menu-main__item--level-2"> <a href="/terrence-j-donnelly" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/304">Terrence J. Donnelly</a> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/built-21st-century-science" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/285">History of the Donnelly Centre</a> <ul class="m-menu-main__list--level-3" data-main-menu-component="third-level-list"> <li class="m-menu-main__item--level-3"> <a href="/banting-and-best-department-medical-research-timeline" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/347">Get to know our history through this interactive timeline</a> </li> <li class="m-menu-main__item--level-3"> <a href="/banting-and-best-department-medical-research" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/344">Banting and Best Department of Medical Research</a> </li> <li class="m-menu-main__item--level-3"> <a href="/brenda-andrews-founding-director-donnelly-centre" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/476">Brenda Andrews, Founding Director of Donnelly Centre</a> </li> <li class="m-menu-main__item--level-3"> <a href="/james-friesen-co-founder-donnelly-centre" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/348">James Friesen, Co-Founder of Donnelly Centre</a> </li> <li class="m-menu-main__item--level-3"> <a href="/cecil-yip-co-founder-donnelly-centre" class="m-menu-main__link--level-3" target="_self" data-drupal-link-system-path="node/346">Cecil Yip, Co-Founder of Donnelly Centre</a> </li> </ul> </li> </ul> </div> <div class="m-menu-main__col--"> <ul class="m-menu-main__list--level-2" data-main-menu-component="second-level-list"> <li class="m-menu-main__item--level-2"> <a href="/staff" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/305">Staff</a> </li> <li class="m-menu-main__item--level-2"> <a href="/image-gallery" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/328">Image Gallery</a> </li> <li class="m-menu-main__item--level-2"> <a href="/contact-us" class="m-menu-main__link--level-2" data-drupal-link-system-path="node/311">Contact Us</a> </li> </ul> </div> </div> </div> </li> </ul> </nav> </nav> </div> </div> </div> </header> <main class="l-page__main"> <div class="l-main-2col"> <div class="l-main-2col__content-wrapper"> <div class="l-main-2col__aside" data-sticky-sidebar-container> <div data-sticky-sidebar-sidebar> <div data-sticky-sidebar-inner> <nav class="m-menu-side" role="navigation" aria-labelledby="block-main-second-level-menu" id="block-main-second-level"> <h2 class="visually-hidden" id="block-main-second-level-menu">Main Second Level Navigation</h2> <ul class="m-menu-side__list--level-1"> <li class="m-menu-side__item--level-1"> <a href="/faculty/brenda-andrews" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/236">Andrews, Brenda</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/stephane-angers" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/458">Angers, Stephane</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/liliana-attisano" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/240">Attisano, Liliana</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/artem-babaian" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/956">Babaian, Artem</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/gary-bader" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/235">Bader, Gary</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/benjamin-blencowe" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/241">Blencowe, Benjamin</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/charles-boone" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/239">Boone, Charles</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/grant-brown" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/242">Brown, Grant</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/warren-chan" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/244">Chan, Warren</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/andrew-fraser" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/238">Fraser, Andrew</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/james-friesen" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/267">Friesen, James (Professor Emeritus)</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/penney-gilbert" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/247">Gilbert, Penney</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/jesse-gillis" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/495">Gillis, Jesse</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/aleksandrina-goeva" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/1457">Goeva, Aleksandrina</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/jack-greenblatt" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/248">Greenblatt, Jack</a> </li> <li class="m-menu-side__item--level-1 is-active"> <a href="/faculty/timothy-hughes" title="" class="m-menu-side__link--level-1 is-active" data-drupal-link-system-path="node/233" aria-current="page">Hughes, Timothy</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/philip-m-kim" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/249">Kim, Philip M.</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/henry-krause" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/251">Krause, Henry</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/j-rafael-montenegro-burke" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/268">Montenegro Burke, Rafael (Rafa)</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/john-morris" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/1410">Morris, John</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/cindi-morshead" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/253">Morshead, Cindi</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/milica-radisic" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/1056">Radisic, Milica</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/hannes-rost" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/266">Röst, Hannes</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/frederick-roth" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/255">Roth, Frederick (Fritz)</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/peter-roy" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/237">Roy, Peter</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/william-ryu" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/256">Ryu, William</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/michael-sefton" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/257">Sefton, Michael</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/molly-shoichet" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/258">Shoichet, Molly</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/igor-stagljar" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/260">Stagljar, Igor</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/mikko-taipale" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/261">Taipale, Mikko</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/derek-van-der-kooy" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/250">van der Kooy, Derek</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/shu-wang" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/1346">Wang, Shu</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/aaron-wheeler" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/262">Wheeler, Aaron</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/christopher-yip" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/263">Yip, Christopher</a> </li> <li class="m-menu-side__item--level-1"> <a href="/faculty/zhaolei-zhang" title="" class="m-menu-side__link--level-1" data-drupal-link-system-path="node/265">Zhang, Zhaolei</a> </li> </ul> </nav> </div> </div> </div> <a class="l-main__a11y-jump" id="main-content" tabindex="-1"></a> <div class="l-main-2col__breadcrumbs"> <div class="m-breadcrumbs__wrapper"> <nav role="navigation" aria-labelledby="system-breadcrumb" class="m-breadcrumbs"> <h2 class="visually-hidden" id="system-breadcrumb">Breadcrumbs</h2> <ol class="m-breadcrumbs__list"> <li class="m-breadcrumbs__item"> <a class="m-breadcrumbs__link" href="/">Home</a> </li> <li class="m-breadcrumbs__item"> <a class="m-breadcrumbs__link" href="/our-scientists">Our Scientists</a> </li> <li class="m-breadcrumbs__item"> Hughes, Timothy </li> </ol> </nav> </div> </div> <div class="l-main-2col__utility"> <div data-drupal-messages-fallback class="hidden"></div> </div> <div class="l-main-2col__content"> <div class="l-main__header-prefix"> <div class="l-main__fac-pretitle"> <span> Professor | Principal Investigator | Chair, Molecular Genetics </span> </div> </div> <div class="o-content-header"> <h1 class="a-heading__t1 " > Timothy Hughes </h1> <div class="o-content-header__post-title"> Department of Molecular Genetics - Billes Chair of Medical Research | Canada Research Chair in Decoding Gene Regulation </div> <div class="o-content-header__subtitle"> <h2>PhD</h2> </div> </div> <div class="l-main__fac-info has-img"> <div class="l-main__fac-image"> <picture> <source srcset="/sites/default/files/styles/square_1_1_200/public/tim01_cropped_0.webp?itok=cQX-U5Ye 200w, /sites/default/files/styles/square_1_1_400/public/tim01_cropped_0.webp?itok=GZ6E524Q 400w, /sites/default/files/styles/square_1_1_600/public/tim01_cropped_0.webp?itok=EKbs6ONR 600w, /sites/default/files/styles/square_1_1_900/public/tim01_cropped_0.webp?itok=iAcRO-RB 900w, /sites/default/files/styles/square_1_1_1200/public/tim01_cropped_0.webp?itok=q95oxfAF 1200w, /sites/default/files/styles/square_1_1_1500/public/tim01_cropped_0.webp?itok=KQzcgelB 1500w, /sites/default/files/styles/square_1_1_1800/public/tim01_cropped_0.webp?itok=cFoSQlI0 1800w, /sites/default/files/styles/square_1_1_2000/public/tim01_cropped_0.webp?itok=rJ2c4FBn 2000w, /sites/default/files/styles/square_1_1_2500/public/tim01_cropped_0.webp?itok=YyCwaZYP 2500w, /sites/default/files/styles/square_1_1_2800/public/tim01_cropped_0.webp?itok=hgMk5tzn 2800w, /sites/default/files/styles/square_1_1_3000/public/tim01_cropped_0.webp?itok=Rt0s_Nd0 3000w" type="image/webp" sizes="(min-width:1280px) 372px, (min-width:900px) 33vw - 40px, (min-width:600px) 50vw - 40px, 100vw - 40px" width="900" height="900"/> <source srcset="/sites/default/files/styles/square_1_1_200/public/tim01_cropped_0.jpg?itok=cQX-U5Ye 200w, /sites/default/files/styles/square_1_1_400/public/tim01_cropped_0.jpg?itok=GZ6E524Q 400w, /sites/default/files/styles/square_1_1_600/public/tim01_cropped_0.jpg?itok=EKbs6ONR 600w, /sites/default/files/styles/square_1_1_900/public/tim01_cropped_0.jpg?itok=iAcRO-RB 900w, /sites/default/files/styles/square_1_1_1200/public/tim01_cropped_0.jpg?itok=q95oxfAF 1200w, /sites/default/files/styles/square_1_1_1500/public/tim01_cropped_0.jpg?itok=KQzcgelB 1500w, /sites/default/files/styles/square_1_1_1800/public/tim01_cropped_0.jpg?itok=cFoSQlI0 1800w, /sites/default/files/styles/square_1_1_2000/public/tim01_cropped_0.jpg?itok=rJ2c4FBn 2000w, /sites/default/files/styles/square_1_1_2500/public/tim01_cropped_0.jpg?itok=YyCwaZYP 2500w, /sites/default/files/styles/square_1_1_2800/public/tim01_cropped_0.jpg?itok=hgMk5tzn 2800w, /sites/default/files/styles/square_1_1_3000/public/tim01_cropped_0.jpg?itok=Rt0s_Nd0 3000w" type="image/jpeg" sizes="(min-width:1280px) 372px, (min-width:900px) 33vw - 40px, (min-width:600px) 50vw - 40px, 100vw - 40px" width="900" height="900"/> <img loading="lazy" srcset="/sites/default/files/styles/square_1_1_200/public/tim01_cropped_0.jpg?itok=cQX-U5Ye 200w, /sites/default/files/styles/square_1_1_400/public/tim01_cropped_0.jpg?itok=GZ6E524Q 400w, /sites/default/files/styles/square_1_1_600/public/tim01_cropped_0.jpg?itok=EKbs6ONR 600w, /sites/default/files/styles/square_1_1_900/public/tim01_cropped_0.jpg?itok=iAcRO-RB 900w, /sites/default/files/styles/square_1_1_1200/public/tim01_cropped_0.jpg?itok=q95oxfAF 1200w, /sites/default/files/styles/square_1_1_1500/public/tim01_cropped_0.jpg?itok=KQzcgelB 1500w, /sites/default/files/styles/square_1_1_1800/public/tim01_cropped_0.jpg?itok=cFoSQlI0 1800w, /sites/default/files/styles/square_1_1_2000/public/tim01_cropped_0.jpg?itok=rJ2c4FBn 2000w, /sites/default/files/styles/square_1_1_2500/public/tim01_cropped_0.jpg?itok=YyCwaZYP 2500w, /sites/default/files/styles/square_1_1_2800/public/tim01_cropped_0.jpg?itok=hgMk5tzn 2800w, /sites/default/files/styles/square_1_1_3000/public/tim01_cropped_0.jpg?itok=Rt0s_Nd0 3000w" sizes="(min-width:1280px) 372px, (min-width:900px) 33vw - 40px, (min-width:600px) 50vw - 40px, 100vw - 40px" width="900" height="900" src="/sites/default/files/styles/square_1_1_600/public/tim01_cropped_0.jpg?itok=EKbs6ONR" alt="Headshot of Timothy Hughes" typeof="foaf:Image" /> </picture> </div> <div class="l-main__fac-links"> <div class="m-text-icon"> <div class='m-text-icon__heading'> <div class="m-text-icon__icon"> <div class="a-icon--xsml"> <i class="fas fa-envelope" data-fa-transform="" data-fa-mask="" ></i> </div> </div> <div class="m-text-icon--simple-text__title"> <h2 class="a-heading__h4 has-link " > <a href="mailto:t.hughes@utoronto.ca" > <span class="a-heading__last-word">t.hughes@utoronto.ca <svg class="a-heading__icon"> <use xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="/themes/webpac/assets/svg/sprite-ui.svg#ico-chevron-right"> </use> </svg> </span> </a> </h2> </div> </div> </div> <div class="m-text-icon"> <div class='m-text-icon__heading'> <div class="m-text-icon__icon"> <div class="a-icon--xsml"> <i class="fas fa-external-link-alt" data-fa-transform="" data-fa-mask="" ></i> </div> </div> <div class="m-text-icon--simple-text__title"> <h2 class="a-heading__h4 has-link " > <a href="http://hugheslab.med.utoronto.ca/" > <span class="a-heading__last-word">Website <svg class="a-heading__icon"> <use xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="/themes/webpac/assets/svg/sprite-ui.svg#ico-chevron-right"> </use> </svg> </span> </a> </h2> </div> </div> </div> <div class="m-text-icon"> <div class='m-text-icon__heading'> <div class="m-text-icon__icon"> <div class="a-icon--xsml"> <i class="fas fa-link" data-fa-transform="" data-fa-mask="" ></i> </div> </div> <div class="m-text-icon--simple-text__title"> <h2 class="a-heading__h4 has-link " > <a href="https://pubmed.ncbi.nlm.nih.gov/?term=Hughes%20TR%20%5BAuthor%5D" > <span class="a-heading__last-word">Publications <svg class="a-heading__icon"> <use xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="/themes/webpac/assets/svg/sprite-ui.svg#ico-chevron-right"> </use> </svg> </span> </a> </h2> </div> </div> </div> </div> </div> <div class="l-main__fac-location"> <div class="m-listing-item-text"> <div class="m-listing-item-text__title">Address</div> <div class="m-listing-item-text__text">Room1302</div> </div> <div class="m-listing-item-text"> <div class="m-listing-item-text__title">Research Interests</div> <div class="m-listing-item-text__text">Transcriptional Regulation</div> </div> <div class="m-listing-item-text"> <div class="m-listing-item-text__title">Appointment Status</div> <div class="m-listing-item-text__text">Primary</div> </div> </div> <div class="l-main__fac-qualifications"> <h2 class="a-type__h4"> Qualification</h2> <ul class="a-list--unordered"> <li>Baylor College of Medicine, Houston, TX, U.S., PhD in Cellular and Molecular Biology, 1998.</li> <li>University of Iowa, Iowa City, IA, U.S., BSc in Electrical Engineering, 1993.</li> <li>University of Iowa, Iowa City, IA, U.S., Bachelor of Music in String Bass Performance, 1991.</li> </ul> </div> <div class="l-main__fac-profile"> <div data-webpack-readmore data-collapsed-height="832" data-offset-height="128" data-more-text="Read more"> <div class="s-wysiwyg"><h3 class="a-heading__h3"><strong>MY RESEARCH OVERVIEW (GO TO <a href="#system">SCIENTIFIC OVERVIEW</a>)</strong></h3> <h4 class="a-heading__h4">How Do Cells See The Genome?</h4> <p>Interpretation of nucleic acid sequence is a fundamental problem in molecular biology. It is now clear that only a small minority of most genomes is protein coding. In contrast, the number and variety of apparent regulatory sequences continues to grow - in human, eclipsing the number of protein coding genes by orders of magnitude. Decoding how regulatory sequences are recognized and interpreted by cells is fundamental to dissecting gene expression mechanisms, interpreting the significance of sequence variants, and understanding the function and evolution of genomes. Despite a wealth of sequencing and expression data, however, it remains surprisingly difficult to predict gene expression patterns on the basis of primary sequence, even in “simple” genomes such as that of yeast. This shortcoming suggest that there are large gaps in available data, and/or that our conceptual models of how transcriptional and post-transcriptional regulation work are too simplistic. </p> <p></p><figure class="align-right"> <img alt="EXAMPLES OF REGULATORY PROTEINS INTERACTING WITH DNA" data-entity-type="file" data-entity-uuid="fbd84dac-8a31-48f6-8635-e2d076ba4460" src="/sites/default/files/inline-images/tim_image.jpg"> <figcaption>EXAMPLES OF REGULATORY PROTEINS INTERACTING WITH DNA</figcaption> </figure> <p><strong>This vexing problem - how do cells recognize DNA and RNA sequence, and act upon it - represents one of the grand challenges of our era, and our goal is to solve it in the general case. </strong><span> </span></p> <p>We know that the problem can be solved, because cellular biochemical mechanisms can easily solve it: foreign DNA introduced into cells is typically regulated in the same way as equivalent native DNA. In living cells, many regulatory factors and processes act in concert, and we therefore believe that a complete index of protein-DNA and protein-RNA sequence motifs will likely be necessary for this task. In addition, many biological complexities will need to be incorporated into computational analyses. For example, DNA and RNA binding proteins interact with one another, and also provide an interface that selectively recruits other enzymes and structural components, thus determining the “epigenetic landscape”. Uncovering the linkages between these layers of regulation is critical to a mechanistic understanding of the functions of individual components as well as the entire <a id="system" name="system">system</a>. </p> <h3 class="a-heading__h3"><strong>SCIENTIFIC RESEARCH OVERVIEW</strong></h3> <p>Major projects in the lab typically involve both wet and dry lab aspects, and many are collaborative, because it often becomes essential to engage experts in diverse and unexpected fields.</p> <p>Project central to the lab include the following:</p> <h4 class="a-heading__h4">1. Improving sequence-based models of gene regulation</h4> <p>Basic questions in this arena encompass how regulatory sequences and even gene structures are defined, and how they are activated. We recently described a computational model that inputs only the sequence preferences of DNA and RNA binding proteins, and accurately predicts known gene structures, as well as expression from randomly-generated sequences (<a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=de+Boer%2C+hughes+Genome+Research+2014">de Boer et al., Genome Research 2014</a>). The model also predicts and explains the origins of non-genic transcripts, and indicates that definition of genomic elements is intimately tied to control of expression levels - a finding that is likely relevant in other genomes, e.g. human, in which the locations of regulatory elements and transcript isoforms often change between cell types. Goals of ongoing efforts include predicting transcript levels, modelling post-transcriptional regulatory mechanisms, and extending these models in other organisms.</p> <h4 class="a-heading__h4">2. Comprehensive views of protein-DNA and protein-RNA recognition</h4> <p>Eukaryotic genomes encode hundreds to thousands of proteins that contain sequence-specific DNA and RNA binding domains. These are the basic building blocks of gene regulation programs, and their binding motifs are an essential ingredient in the gene regulation formula. We are systematically decoding protein-DNA and proten-RNA sequence preferences across the eukaryotes (<a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=Weirauch%2C+Yang+et+al.%2C+Cell+2014">Weirauch, Yang et al., Cell 2014</a>; <a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=Ray%2C+Kazan%2C+Cook%2C+Weirauch%2C+Najafabadi+et+al.%2C+Nature+2013">Ray, Kazan, Cook, Weirauch, Najafabadi et al., Nature 2013</a>) using a variety of approaches, including new experimental and computational techniques that we develop.</p> <h4 class="a-heading__h4">3. Dissecting the evolution of gene regulation mechanisms</h4> <p>Many DNA and RNA binding proteins display deep evolutionary conservation, but most lineages also contain families in which divergence is common. Striking cases include the ~700 human C2H2 zinc finger proteins, whose expansion appears to be driven by retroelements, which are highly enriched among genomic sequences bound in vivo (<a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=Najafabadi%2C+Mnaimneh%2C+Schmitges+et+al.%2C+Nature+Biotechnology+2015">Najafabadi, Mnaimneh, Schmitges et al., Nature Biotechnology 2015</a>). In <em>C. elegans</em>, the nuclear hormone receptors have undergone a similar expansion and diversification in binding sites (<a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=Narasimhan%2C+Lambert+et+al.%2C+eLife+2015">Narasimhan, Lambert et al., eLife 2015</a>). We anticipate that global analysis of binding sites, sequence preferences, protein partners, and the impact of genetic perturbations on transcript levels will provide insight into the function and origin of newly-evolved proteins.</p> <h4 class="a-heading__h4"><strong>SELECT PUBLICATIONS</strong></h4> <blockquote> <ul> <li><em><a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=25690854">C2H2 zinc finger proteins greatly expand the human regulatory lexicon</a>.</em> Najafabadi HS, Mnaimneh S, Schmitges FW, Garton M, Lam KN, Yang A, Albu M, Weirauch MT, Radovani E, Kim PM, Greenblatt J, Frey BJ, Hughes TR. <strong>Nat Biotechnol</strong>. 2015 May;33(5):555-62.</li> <li><a href="http://www.ncbi.nlm.nih.gov/pubmed/25215497"><em>Determination and inference of eukaryotic transcription factor sequence specificity.</em></a> Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, Walhout AJ, Bouget FY, Ratsch G, Larrondo LF, Ecker JR, Hughes TR. <strong>Cell</strong>. 2014 Sep 11;158(6):1431-43.</li> <li><em><a href="http://www.ncbi.nlm.nih.gov/pubmed/?term=23846655">A compendium of RNA-binding motifs for decoding gene regulation</a>.</em> Ray D, Kazan H, Cook KB, Weirauch MT, Najafabadi HS, Li X, Gueroussov S, Albu M, Zheng H, Yang A, Na H, Irimia M, Matzat LH, Dale RK, Smith SA, Yarosh CA, Kelly SM, Nabet B, Mecenas D, Li W, Laishram RS, Qiao M, Lipshitz HD, Piano F, Corbett AH, Carstens RP, Frey BJ, Anderson RA, Lynch KW, Penalva LO, Lei EP, Fraser AG, Blencowe BJ, Morris QD, Hughes TR. <strong>Nature</strong>. 2013 Jul 11;499(7457):172-7.</li> </ul> </blockquote></div> </div> </div> <div class="l-main__fac-pager"> <ul class="prev-next-wrapper"> <li class="prev-next-previous prev-next-item"> <a class="a-btn" href="/faculty/jack-greenblatt"> <i class="prev-next-item__icon fas fa-chevron-left"></i> Previous </a> </li> <li class="prev-next-next prev-next-item"> <a class="a-btn" href="/faculty/philip-m-kim"> Next <i class="prev-next-item__icon fas fa-chevron-right"></i> </a> </li> </ul> </div> </div> </div> </div> </main> <footer class="l-page__footer"> <div class="o-site-footer"> <div class="o-site-footer__main o-site-footer__main-default"> <div class="o-site-footer__address"> Donnelly Centre for Cellular and Biomolecular Research<br> University of Toronto 160 College Street, Room 230,<br> Toronto, Ontario CANADA M5S 3E1<br> Tel: (416) 978-8861 Fax: (416) 978-8287 </div> <nav class="o-site-footer__links"> <div class="o-site-footer__social"> <a href="https://www.linkedin.com/company/donnelly-centre-for-cellular-and-biomolecular-research/" target="_blank" class="a-btn--icon " > <div class="a-icon"> <i class="fab fa-linkedin" data-fa-transform="" data-fa-mask="" ></i> <span class="u-visually--hidden">Follow us on LinkedIn</span> </div> </a> <a href="https://twitter.com/DonnellyCentre" target="_blank" class="a-btn--icon " > <div class="a-icon"> <i class="fab fa-square-x-twitter" data-fa-transform="" data-fa-mask="" ></i> <span class="u-visually--hidden">Follow us on Twitter</span> </div> </a> <a href="https://www.youtube.com/playlist?list=PLEfWVIQeGAodxdY2TZpmVVwlOKcweoteW" target="_blank" class="a-btn--icon " > <div class="a-icon"> <i class="fab fa-youtube-square" data-fa-transform="" data-fa-mask="" ></i> <span class="u-visually--hidden">Follow us on Youtube</span> </div> </a> </div> <div class="o-site-footer__acknowledge"> <a href="https://indigenous.utoronto.ca/about/land-acknowledgement" class="a-link--white " > <span class="a-link__text">Traditional Land Acknowledgement</span> </a> </div> </nav> </div> <div class="o-site-footer__shortcuts"> <nav role="navigation" aria-labelledby="block-header-shortcuts-menu" id="block-header-shortcuts"> <h2 class="visually-hidden" id="block-header-shortcuts-menu">Header Shortcuts</h2> <ul class="m-menu-header-shortcuts"> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/contacts.htm" class="m-menu-header-shortcuts__link">Emergency</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/campuses/maps.htm" class="m-menu-header-shortcuts__link">Maps</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/" class="m-menu-header-shortcuts__link">U of T Main</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="http://www.utoronto.ca/a-z.htm" class="m-menu-header-shortcuts__link">A-Z Directory</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="/contact-us" class="m-menu-header-shortcuts__link" data-drupal-link-system-path="node/311">Contact</a> </li> <li class="m-menu-header-shortcuts__item"> <a href="https://engage.utoronto.ca/site/SPageServer?pagename=donate#/collection/53" class="m-menu-header-shortcuts__link">Donate</a> </li> </ul> </nav> </div> <div class="o-site-footer__bottom-wrapper"> <div class="o-site-footer__bottom "> <div class="o-site-footer__legal"> © 2025 University of Toronto</div> <div class="o-site-footer__logo"> <img class="m-logo--image__img" src="/themes/webpac//images/icons/temerty-medicine-wordmark-coloured.svg" alt="Visit Termerty Faculty of Medicine Home" width="505" height="120" > </div> </div> </div> </div> </footer> <nav role="navigation" aria-labelledby="menu-mobile-menu" id="menu-mobile" data-menu-mobile="" class="m-menu-mobile"> <h2 class="visually-hidden" id="menu-mobile-menu">Mobile Menu</h2> <ul class="m-menu-mobile__list--level-1"> <li class="m-menu-mobile__item--level-1 is-active has-submenu"> <a href="/our-scientists" class="m-menu-mobile__link--level-1 is-toggle" data-drupal-link-system-path="node/398">Our Scientists</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/brenda-andrews" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/236">Andrews, Brenda</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/stephane-angers" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/458">Angers, Stephane</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/liliana-attisano" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/240">Attisano, Liliana</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/artem-babaian" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/956">Babaian, Artem</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/gary-bader" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/235">Bader, Gary</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/benjamin-blencowe" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/241">Blencowe, Benjamin</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/charles-boone" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/239">Boone, Charles</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/grant-brown" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/242">Brown, Grant</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/warren-chan" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/244">Chan, Warren</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/andrew-fraser" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/238">Fraser, Andrew</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/james-friesen" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/267">Friesen, James (Professor Emeritus)</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/penney-gilbert" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/247">Gilbert, Penney</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/jesse-gillis" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/495">Gillis, Jesse</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/aleksandrina-goeva" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/1457">Goeva, Aleksandrina</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/jack-greenblatt" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/248">Greenblatt, Jack</a> </li> <li class="m-menu-mobile__item--level-2 is-active"> <a href="/faculty/timothy-hughes" title="" class="m-menu-mobile__link--level-2 is-active" data-drupal-link-system-path="node/233" aria-current="page">Hughes, Timothy</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/philip-m-kim" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/249">Kim, Philip M.</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/henry-krause" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/251">Krause, Henry</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/j-rafael-montenegro-burke" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/268">Montenegro Burke, Rafael (Rafa)</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/john-morris" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/1410">Morris, John</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/cindi-morshead" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/253">Morshead, Cindi</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/milica-radisic" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/1056">Radisic, Milica</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/hannes-rost" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/266">Röst, Hannes</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/frederick-roth" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/255">Roth, Frederick (Fritz)</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/peter-roy" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/237">Roy, Peter</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/william-ryu" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/256">Ryu, William</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/michael-sefton" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/257">Sefton, Michael</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/molly-shoichet" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/258">Shoichet, Molly</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/igor-stagljar" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/260">Stagljar, Igor</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/mikko-taipale" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/261">Taipale, Mikko</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/derek-van-der-kooy" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/250">van der Kooy, Derek</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/shu-wang" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/1346">Wang, Shu</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/aaron-wheeler" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/262">Wheeler, Aaron</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/christopher-yip" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/263">Yip, Christopher</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/faculty/zhaolei-zhang" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/265">Zhang, Zhaolei</a> </li> </ul> </li> <li class="menu-firstchild m-menu-mobile__item--level-1 has-submenu"> <a href="/our-research-0" class="m-menu-mobile__link--level-1 is-toggle">Research</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/our-research-0" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/411">Our Research</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/pubmed" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/383">Publications (RSS feed)</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-1 has-submenu"> <a href="/platforms" class="m-menu-mobile__link--level-1 is-toggle" data-drupal-link-system-path="node/402">Platforms</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/accelerator-donnelly-collaboration" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/376">Accelerator for Donnelly Collaboration</a> </li> <li class="m-menu-mobile__item--level-2 has-submenu"> <a href="/donnelly-sequencing-centre" class="m-menu-mobile__link--level-2 is-toggle" data-drupal-link-system-path="node/307">Donnelly Sequencing Centre</a> <ul class="m-menu-mobile__list--level-3"> <li class="m-menu-mobile__item--level-3"> <a href="/what-we-offer" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/365">What We Offer</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/getting-started" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/366">Getting Started</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/dsc-team" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/367">The DSC Team</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/selected-publications" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/368">Publications</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/academic-outreach" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/369">Academic Outreach</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/world-sequencing" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/371">The World of Sequencing</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-2"> <a href="/donnelly-mass-spec-facility" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/364">Donnelly Mass Spec Facility</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-1 has-submenu"> <a href="/students" class="m-menu-mobile__link--level-1 is-toggle" data-drupal-link-system-path="node/401">Students</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2 has-submenu"> <a href="/student-awards" class="m-menu-mobile__link--level-2 is-toggle" data-drupal-link-system-path="node/294">Student Awards</a> <ul class="m-menu-mobile__list--level-3"> <li class="m-menu-mobile__item--level-3"> <a href="/cecil-yip-doctoral-research-award" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/297">Cecil Yip Doctoral Research Award</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/donnelly-centre-research-thesis-prize" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/298">Donnelly Centre Research Thesis Prize</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/jennifer-comyn-graduate-award-cancer-research" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/1244">Jennifer Comyn Graduate Award for Cancer Research</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/jennifer-dorrington-graduate-research-award" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/296">Jennifer Dorrington Graduate Research Award</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-2"> <a href="/donnelly-centre-graduate-student-association" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/326">Donnelly Centre Graduate Student Association</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/summer-undergraduate-research-program" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/355">Summer Undergraduate Research Program</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-1 has-submenu"> <a href="/postdocs" class="m-menu-mobile__link--level-1 is-toggle" data-drupal-link-system-path="node/403">Postdocs</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/charles-h-best-postdoctoral-fellowship" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/295">Charles H. Best Postdoctoral Fellowship</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/donnelly-centre-home-fellowship" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/1353">Donnelly Centre Home Fellowship</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/donnelly-centre-research-excellence-award" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/356">Donnelly Centre Research Excellence Award</a> </li> </ul> </li> <li class="menu-firstchild m-menu-mobile__item--level-1 has-submenu"> <a href="/news" class="m-menu-mobile__link--level-1 is-toggle">News</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/news" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/381">News</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/donnelly-centre-magazine" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/374">Donnelly Centre Magazine</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/annual-reports" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/400">Annual Reports</a> </li> <li class="m-menu-mobile__item--level-2 has-submenu"> <a href="/donnelly-media" class="m-menu-mobile__link--level-2 is-toggle" data-drupal-link-system-path="node/316">Donnelly in the Media</a> <ul class="m-menu-mobile__list--level-3"> <li class="m-menu-mobile__item--level-3"> <a href="/media-archive-2008-2020" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/426">In the Media Archive (2008-2020)</a> </li> </ul> </li> </ul> </li> <li class="menu-firstchild m-menu-mobile__item--level-1 has-submenu"> <a href="/current-opportunities" class="m-menu-mobile__link--level-1 is-toggle">Careers</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/current-opportunities" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/283">Current Opportunities</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/working-and-living-toronto" title="" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/299">Working and Living in Toronto</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-1 has-submenu"> <a href="/events" class="m-menu-mobile__link--level-1 is-toggle" data-drupal-link-system-path="node/1249">Events</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/events" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/1249">Events</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/postdoctoral-fellow-and-research-associate-seminars" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/323">Postdoctoral Fellow and Research Associate Seminars</a> </li> </ul> </li> <li class="menu-firstchild m-menu-mobile__item--level-1 has-submenu"> <a href="/welcome-director" class="m-menu-mobile__link--level-1 is-toggle">About Us</a> <ul class="m-menu-mobile__list--level-2"> <li class="m-menu-mobile__item--level-2"> <a href="/welcome-director" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/455">Director's Welcome Message</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/terrence-j-donnelly" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/304">Terrence J. Donnelly</a> </li> <li class="m-menu-mobile__item--level-2 has-submenu"> <a href="/built-21st-century-science" class="m-menu-mobile__link--level-2 is-toggle" data-drupal-link-system-path="node/285">History of the Donnelly Centre</a> <ul class="m-menu-mobile__list--level-3"> <li class="m-menu-mobile__item--level-3"> <a href="/banting-and-best-department-medical-research-timeline" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/347">Get to know our history through this interactive timeline</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/banting-and-best-department-medical-research" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/344">Banting and Best Department of Medical Research</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/brenda-andrews-founding-director-donnelly-centre" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/476">Brenda Andrews, Founding Director of Donnelly Centre</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/james-friesen-co-founder-donnelly-centre" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/348">James Friesen, Co-Founder of Donnelly Centre</a> </li> <li class="m-menu-mobile__item--level-3"> <a href="/cecil-yip-co-founder-donnelly-centre" class="m-menu-mobile__link--level-3" data-drupal-link-system-path="node/346">Cecil Yip, Co-Founder of Donnelly Centre</a> </li> </ul> </li> <li class="m-menu-mobile__item--level-2"> <a href="/staff" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/305">Staff</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/image-gallery" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/328">Image Gallery</a> </li> <li class="m-menu-mobile__item--level-2"> <a href="/contact-us" class="m-menu-mobile__link--level-2" data-drupal-link-system-path="node/311">Contact Us</a> </li> </ul> </li> <div id="menu-mobile-header-content"> <div class="m-menu-mobile__header-content"> </div> </div> </ul> </nav> </div> <script>window.dataLayer = window.dataLayer || []; window.dataLayer.push({"drupalLanguage":"en","drupalCountry":null,"siteName":"Donnelly Centre for Cellular and Biomolecular Research","entityName":"migrate","entityType":"node","entityBundle":"wp_faculty","entityId":"233","entityTitle":"Timothy Hughes","userUid":0,"breadcrumbLevel1":"Our Scientists","breadcrumbLevel2":"Hughes, Timothy","breadcrumbLevel3":""});</script> <link rel="stylesheet" href="https://use.typekit.net/zls1oah.css"> <script type="application/json" data-drupal-selector="drupal-settings-json">{"path":{"baseUrl":"\/","pathPrefix":"","currentPath":"node\/233","currentPathIsAdmin":false,"isFront":false,"currentLanguage":"en"},"pluralDelimiter":"\u0003","suppressDeprecationErrors":true,"ajaxPageState":{"libraries":"eJx9j1EKAyEMRC8keiSJmnWlMVlM7LK3r5RCSz_27zETMjNphjR93jE_cLgMizaauocv-o48XZ5q0iOU3jh0aGzIwBkji7WM6goYEFw4QsIdnk2Guq2RLSHDYU3YbcIGJ6p0DD_s9Vl9GsBFb09UqBVXRSphBAa6VrKGf8HppYY9JFB0J6YD8no1eRVcJWIZchQ5-caK78Ufv5IkoBdEPnSX","theme":"webpac","theme_token":null},"ajaxTrustedUrl":[],"bu":{"_core":{"default_config_hash":"AblkqYHezKA1TuKStbuiQqvACikY5ElI-bHxMy-C25U"},"notify_ie":11,"notify_firefox":-2,"notify_opera":-2,"notify_safari":-2,"notify_chrome":-2,"insecure":false,"unsupported":false,"mobile":false,"visibility_type":"hide","visibility_pages":"admin\/*","source":"\/\/browser-update.org\/update.min.js","show_source":"","position":"top","text_override":"","reminder":4380,"reminder_closed":4380,"new_window":true,"url":"","no_close":false,"test_mode":false},"dataLayer":{"defaultLang":"en","languages":{"en":{"id":"en","name":"English","direction":"ltr","weight":0}}},"google_analytics":{"account":"UA-34496632-11","trackOutbound":true,"trackMailto":true,"trackTel":true,"trackDownload":true,"trackDownloadExtensions":"7z|aac|arc|arj|asf|asx|avi|bin|csv|doc(x|m)?|dot(x|m)?|exe|flv|gif|gz|gzip|hqx|jar|jpe?g|js|mp(2|3|4|e?g)|mov(ie)?|msi|msp|pdf|phps|png|ppt(x|m)?|pot(x|m)?|pps(x|m)?|ppam|sld(x|m)?|thmx|qtm?|ra(m|r)?|sea|sit|tar|tgz|torrent|txt|wav|wma|wmv|wpd|xls(x|m|b)?|xlt(x|m)|xlam|xml|z|zip"},"user":{"uid":0,"permissionsHash":"e5117ae9e1952bc666f6f6eded612e9062e3e550f37a6e73234d0ebf81dbff34"}}</script> <script src="/sites/default/files/js/js_XHZV1ZU0EtL9PuT059oZTQjPp65mipAtLDK5ggWzgJg.js?scope=footer&delta=0&language=en&theme=webpac&include=eJx9jkEOwyAMBD-E4EnIxg5BdewIQ1B-314qVT3ktjs7h8WZcMayc3lxDwQDBG7uCXmHq1n3sJkOWOx2cPrJ0a8a3aTRo4EdlDxUsyqcQUHu0YqnfxAW4wklVTEE-bbNpn4-NdNM3U6ypQ9TPljnG5FMUo4"></script> </body> </html>