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href="https://doi.org/10.1093/database/bay123" rel="nofollow noopener" target="_blank">doi:10.1093/database/bay123</a> </td> </tr> </tbody></table> <h2 id="cite_archive">Cite the PDB archive</h2> <p> Please cite "the PDB archive" with the reference <a href="/info/cite-us#ref1_2019">(31)</a> in the list of publications. </p> <br> <h3>References</h3> <ol reversed=""> <li id="ref1_2024"> <span class="ref_title">PDB NextGen Archive: centralizing access to integrated annotations and enriched structural information by the Worldwide Protein Data Bank.</span> <span class="ref_author">Choudhary P, Feng Z, Berrisford J, Chao H, Ikegawa Y, Peisach E, Piehl DW, Smith J, Tanweer A, Varadi M, Westbrook JD, Young JY, Patwardhan A, Morris KL, Hoch JC, Kurisu G, Velankar S, Burley SK</span> <span class="ref_journal">Database (Oxford)</span> <span class="ref_volume">2024</span> <span class="ref_date">May 27</span> <span class="ref_year">2024</span> <span class="ref_page">baae041</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/38803272" rel="nofollow noopener" target="_blank">PMID: 38803272</a></span> <span class="ref_doi"><a href="https://doi.org/10.1093/database/baae041" rel="nofollow noopener" target="_blank">doi: 10.1093/database/baae041</a></span> </li> <li id="ref2_2024"> <span class="ref_title">IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods.</span> <span class="ref_author">Vallat B, Webb BM, Westbrook JD, Goddard TD, Hanke CA, Graziadei A, Peisach E, Zalevsky A, Sagendorf J, Tangmunarunkit H, Voinea S, Sekharan M, Yu J, Bonvin AAMJJ, DiMaio F, Hummer G, Meiler J, Tajkhorshid E, Ferrin TE, Lawson CL, Leitner A, Rappsilber J, Seidel CAM, Jeffries CM, Burley SK, Hoch JC, Kurisu G, Morris K, Patwardhan A, Velankar S, Schwede T, Trewhella J, Kesselman C, Berman HM, Sali A.</span> <span class="ref_journal">J Mol Biol.</span> <span class="ref_volume"></span> <span class="ref_page">168546</span> <span class="ref_year">2024</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/38508301" rel="nofollow noopener" target="_blank">PMID: 38508301</a></span> <span class="ref_doi"><a href="https://doi.org/10.1016/j.jmb.2024.168546" rel="nofollow noopener" target="_blank">doi: 10.1016/j.jmb.2024.168546</a></span> </li> <li id="ref3_2024"> <span class="ref_title">Restraint validation of biomolecular structures determined by NMR in the Protein Data Bank.</span> <span class="ref_author">Baskaran K, Ploskon E, Tejero R, Yokochi M, Harrus D, Liang Y, Peisach E, Persikova I, Ramelot TA, Sekharan M, Tolchard J, Westbrook JD, Bardiaux B, Schwieters CD, Patwardhan A, Velankar S, Burley SK, Kurisu G, Hoch JC, Montelione GT, Vuister GW, Young JY</span> <span class="ref_journal">Structure</span> <span class="ref_volume"></span> <span class="ref_page">S0969-2126(24)00050-9</span> <span class="ref_date">March 14</span> <span class="ref_year">2024</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/38490206" rel="nofollow noopener" target="_blank">PMID: 38490206</a></span> <span class="ref_doi"><a href="https://doi.org/10.1016/j.str.2024.02.011" rel="nofollow noopener" target="_blank">doi: 10.1016/j.str.2024.02.011</a></span> </li> <li id="ref4_2024"> <span class="ref_title">Community recommendations on cryoEM data archiving and validation.</span> <span class="ref_author">Kleywegt GJ, Adams PD, Butcher SJ, Lawson CL, Rohou A, Rosenthal PB, Subramaniam S, Topf M, Abbott S, Baldwin PR, Berrisford JM, Bricogne G, Choudhary P, Croll TI, Danev R, Ganesan SJ, Grant T, Gutmanas A, Henderson R, Heymann JB, Huiskonen JT, Istrate A, Kato T, Lander GC, Lok SM, Ludtke SJ, Murshudov GN, Pye R, Pintilie GD, Richardson JS, Sachse C, Salih O, Scheres SHW, Schroeder GF, Sorzano COS, Stagg SM, Wang Z, Warshamanage R, Westbrook JD, Winn MD, Young JY, Burley SK, Hoch JC, Kurisu G, Morris K, Patwardhan A, Velankar S</span> <span class="ref_journal">IUCrJ</span> <span class="ref_volume">11</span> <span class="ref_part">2</span> <span class="ref_page">140-151</span> <span class="ref_date">March 1</span> <span class="ref_year">2024</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/38358351" rel="nofollow noopener" target="_blank">PMID: 38358351</a></span> <span class="ref_doi"><a href="https://doi.org/10.1107/S2052252524001246" rel="nofollow noopener" target="_blank">doi: 10.1107/S2052252524001246</a></span> </li> <li id="ref5_2024"> <span class="ref_title">EMDB-the Electron Microscopy Data Bank.</span> <span class="ref_author">wwPDB Consortium</span> <span class="ref_journal">Nucleic Acids Res.</span> <span class="ref_volume">52</span> <span class="ref_issue">D1</span> <span class="ref_page">D456–D465</span> <span class="ref_date">Jan 5</span> <span class="ref_year">2024</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/37994703" rel="nofollow noopener" target="_blank">PMID: 37994703</a></span> <span class="ref_doi"><a href="https://doi.org/10.1093/nar/gkad1019" rel="nofollow noopener" target="_blank">doi: 10.1093/nar/gkad1019</a></span> </li> <li id="ref1_2023"> <span class="ref_title">Announcing the launch of Protein Data Bank China as an Associate Member of the Worldwide Protein Data Bank Partnership.</span> <span class="ref_author">Xu W, Velankar S, Patwardhan A, Hoch JC, Burley SK, Kurisu G</span> <span class="ref_journal">Acta Crystallogr D Struct Biol</span> <span class="ref_volume">79</span> <span class="ref_part">9</span> <span class="ref_page">792-795</span> <span class="ref_date">Sep 1</span> <span class="ref_year">2023</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/37561405" rel="nofollow noopener" target="_blank">PMID: 37561405</a></span> <span class="ref_doi"><a href="https://doi.org/10.1107/S2059798323006381" rel="nofollow noopener" target="_blank">doi: 10.1107/S2059798323006381</a></span> </li> <li id="ref2_2023"> <span class="ref_title">ModelCIF: An Extension of PDBx/mmCIF Data Representation for Computed Structure Models.</span> <span class="ref_author">Vallat B, Tauriello G, Bienert S, Haas J, Webb BM, Žídek A, Zheng W, Peisach E, Piehl DW, Anischanka I, Sillitoe I, Tolchard J, Varadi M, Baker D, Orengo C, Zhang Y, Hoch JC, Kurisu G, Patwardhan A, Velankar S, Burley SK, Sali A, Schwede T, Berman HM, Westbrook JD</span> <span class="ref_journal">J Mol Biol.</span> <span class="ref_volume">435</span> <span class="ref_issue">14</span> <span class="ref_page">168021</span> <span class="ref_date">Jul 15</span> <span class="ref_year">2023</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/36828268" rel="nofollow noopener" target="_blank">PMID: 36828268</a></span> <span class="ref_doi"><a href="https://doi.org/10.1016/j.jmb.2023.168021" rel="nofollow noopener" target="_blank">doi: 10.1016/j.jmb.2023.168021</a></span> </li> <li id="ref3_2023"> <span class="ref_title">Biological Magnetic Resonance Data Bank.</span> <span class="ref_author">Hoch JC, Baskaran K, Burr H, Chin J, Eghbalnia HR, Fujiwara T, Gryk MR, Iwata T, Kojima C, Kurisu G, Maziuk D, Miyanoiri Y, Wedell JR, Wilburn C, Yao H, Yokochi M</span> <span class="ref_journal">Nucleic Acids Res.</span> <span class="ref_volume">51</span> <span class="ref_issue">D1</span> <span class="ref_page">D368-D376</span> <span class="ref_date">Jan 6</span> <span class="ref_year">2023</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/36478084" rel="nofollow noopener" target="_blank">PMID: 36478084</a></span> <span class="ref_doi"><a href="https://doi.org/10.1093/nar/gkac1050" rel="nofollow noopener" target="_blank">doi: 10.1093/nar/gkac1050</a></span> </li> <li id="ref2_2022"> <span class="ref_title">History of Protein Data Bank Japan: standing at the beginning of the age of structural genomics.</span> <span class="ref_author">Kurisu G, Bekker GJ, Nakagawa A</span> <span class="ref_journal">Biophys Rev.</span> <span class="ref_volume">14</span> <span class="ref_issue">6</span> <span class="ref_page">1233-1238</span> <span class="ref_date">Dec 9</span> <span class="ref_year">2022</span> <span class="ref_pmid"><a href="https://www.ncbi.nlm.nih.gov/pubmed/36532871" rel="nofollow noopener" target="_blank">PMID: 36532871</a></span> <span class="ref_doi"><a href="https://doi.org/10.1007/s12551-022-01021-w" rel="nofollow noopener" target="_blank">doi: 10.1007/s12551-022-01021-w</a></span> </li> <li id="ref3_2022"> <span class="ref_title">PDBx/mmCIF Ecosystem: Foundational Semantic Tools for Structural Biology.</span> <span class="ref_author">Westbrook JD, Young JY, Shao C, Feng Z, Guranovic V, Lawson CL, Vallat B, Adams PD, Berrisford JM, Bricogne G, Diederichs K, Joosten RP, Keller P, Moriarty NW, Sobolev OV, Velankar S, Vonrhein C, Waterman DG, Kurisu G, Berman HM, Burley SK, Peisach E</span> <span class="ref_journal">J Mol Biol.</span> <span 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(1996) Green fluorescent protein from Aequorea victoria doi: <a href="https://doi.org/10.2210/pdb1ema/pdb" rel="nofollow noopener" target="_blank">10.2210/pdb1ema/pdb</a> </p><p> Literature Citation:<br> Ormo, M., Cubitt, A.B., Kallio, K., Gross, L.A., Tsien, R.Y., Remington, S.J. (1996) Crystal structure of the Aequorea victoria green fluorescent protein Science 273: 1392-1395 doi: <a href="https://doi.org/10.1126/science.273.5280.1392" rel="nofollow noopener" target="_blank">10.1126/science.273.5280.1392</a> </p> </li> <li>A PDB structure without a corresponding publication should be referenced by PDB ID and cited using the DOI Citation (entry authors, deposition year, structure title, and DOI): <br> <p> PDB ID: 1ci0 </p><p> DOI Citation:<br> Shi, W., Ostrov, D.A., Gerchman, S.E., Graziano, V., Kycia, H., Studier, B., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC) (1999) PNP Oxidase from Saccharomyces cerevisiae doi: <a href="https://doi.org/10.2210/pdb1ci0/pdb" rel="nofollow noopener" target="_blank">10.2210/pdb1ci0/pdb</a> </p> </li> </ul> </div><div style="margin-left: 3em; padding-bottom: 1.25em;"><hr class="leftHR"><div style="font-size: 0.75em;"><span property="datePublished">Created: 2020-10-30</span> <span 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