CINXE.COM
Welcome to PIR [Protein Information Resource]
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN"> <HTML> <HEAD> <TITLE>Welcome to PIR [Protein Information Resource]</TITLE> <link rel="shortcut icon" href="favicon.ico"> <LINK href="/pirwww/stylesheet/styles.css" type="text/css" rel="stylesheet"> <SCRIPT language=JavaScript src="/pirwww/scripts/progress_bar.js" type="text/javascript"></SCRIPT> <style type="text/css"> a:active { color:#336699; text-decoration:underline} a:link { color:#336699; text-decoration:underline} a:visited { color:#996666; text-decoration:underline } a:hover { color: #FFAA00; text-decoration: underline} a.nounderline{text-decoration:none} </style> <!-- Global site tag (gtag.js) - Google Analytics --> <script async src="https://www.googletagmanager.com/gtag/js?id=UA-4232355-1"></script> <script> window.dataLayer = window.dataLayer || []; function gtag(){dataLayer.push(arguments);} gtag('js', new Date()); gtag('config', 'UA-4232355-1'); </script> <style> table.uni { font-family: Verdana, Tahoma, Arial, Helvetica, sans-serif; color:#000000;font-size:10; background-color:#ffffff; border:1px solid; margin-bottom:1px; } </style> </HEAD> <BODY bgColor="#cccccc" background="/pirwww/images/temp/bg02.gif" leftMargin="0" topMargin="0" marginwidth="0" marginheight="0" > <table border="0" cellspacing="0" cellpadding="0" width=100%><tr><td> <MAP NAME="PIRBanner_Map"> <AREA SHAPE="rect" alt="home" COORDS="16,16,110,60" HREF="/" TARGET="_top"> <AREA SHAPE="rect" alt="uniprot" COORDS="140,36,178,50" HREF="http://www.uniprot.org/" TARGET="_blank"> </MAP> <TABLE cellSpacing=0 cellPadding=0 width="100%" border=0 height=80> <TR> <TD><img alt='' src="/pirwww/images/temp/PIRBanner.png" border="0" usemap="#PIRBanner_Map"></TD> <TD width="99%" nowrap height=1 background="/pirwww/images/temp/blueSpacer.png"> <img alt='' src="/pirwww/images/spacer.gif" width="1" height="1" border=0> </TD> <td align=right vAlign=top height="80" width="400" background="/pirwww/images/temp/gradientHome6.png"> <table border=0 cellpadding=0 cellspacing=0 width="400" height=80> <form action="/cgi-bin/textsearch.pl" id="textSearch" method="get" name="textSearchForm" style="MARGIN: 0px"> <tr> <td width=400 colspan=7><img alt='' src="/pirwww/images/spacer.gif" width=400 height="30"></td> </tr> <tr> <td><img alt='' src="/pirwww/images/spacer.gif" width="40" height="1"></td> <td align=right nowrap class=searchLable></td> <td><img alt='' src="/pirwww/images/spacer.gif" width="8" height="1"></td> <td align=right></td> <td><img alt='' src="/pirwww/images/spacer.gif" width="2" height="1"></td> <td align=right></td> <td><img alt='' src="/pirwww/images/spacer.gif" width="26" height="1"></td> </tr> <input type=hidden name=field0 value=ALL> <input type=hidden name=search value=1> </form> </table> </td> </TR> </TABLE> <style> <!-- .radio1 { font-size:4px; background-color:transparent; border:1px; border-color:transparent; border:transparent; } .searchBannerBox { font-family: Verdana, Tahoma, Arial, Helvetica, sans-serif; font-size: 11px; WIDTH: 180px; HEIGHT:18px } td.searchLable { color:#ffffff; font-family:Verdana,Arial, Helvetica, sans-serif; font-size:10px; font-weight:bold } table.result { color:#000000; background-color:#ffffff; border:1px solid #333333; } th.result { color:#ffffff; background-color:#eeeeee; padding-bottom:5px; } tr.resultEvenRow { background-color:#eeeeee; padding-bottom:5px; } td.result { color:#000000; background-color:#FFFFFF; } td.tableHead{ color:#000000; background-color:#c1d0df; text-align:left; font-weight:bold; } .hide2 { position:absolute; visibility:hidden; } .show2 { position:absolute; visibility:visible; } --> </style> <!-- ##### home --> <TABLE cellSpacing=0 cellPadding=0 width=100% bgColor=#333333 border=0><tr> <TD><img alt='' src='/pirwww/images/temp/leftHome.png'></TD><!-- ############### group dependent--> <td class=sml01 width=99% background='/pirwww/images/temp/bgcolor.png'> </td> <noscript> <td> <table bgcolor="#4a4a4a" width="100%" height="21" border="0" cellspacing="0" cellpadding="0"> <tr> <td class="nrm02" nowrap> <a href="/" class="m"><font face=verdana size="2pt" color="white">Home</font></a> <a href="/pirwww/about/" class="m"><font face=verdana size="2pt" color="white">About PIR</font></a> <a href="/pirwww/dbinfo/" class="m"><font face=verdana size="2pt" color="white">Databases</font></a> <a href="/pirwww/search/" class="m"><font face=verdana size="2pt" color="white">Search/Retrieval</font></a> <a href="/pirwww/download/" class="m"><font face=verdana size="2pt" color="white">Download</font></a> <a href="/pirwww/support/" class="m"><font face=verdana size="2pt" color="white">Support</font></a> </td> </tr> </table> </td> </noscript> </tr></table> <TABLE cellSpacing=0 cellPadding=0 width=100% bgColor=#ffffff border=0> <TR vAlign=top> <TD align=left nowrap bgcolor='#ffffff' width=678> <!-- The closing half of the body frame is in half_frame_close.inc--> <!-- ############## page dependent block--> <!-- ############## page dependent block--> <!-- YOUR CONTENT starts. --> <TABLE cellpadding=0 cellspacing=0 background="/pirwww/images/temp/bg02.gif" width=100%> <TR> <!-- left spacer --> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="94" height="1" border=0></TD> <!-- center container --> <TD bgcolor="#ffffff"> <TABLE cellspacing=5 cellpadding=0 width=678> <!-- Slogan --> <TR> <TD align="center" width="100%"> <img alt='integreted protein informatics resource for genomic, proteomic and systems biology research' src="/pirwww/images/pirslogan.jpg"> </TD> </TR> <!-- UniProt --> <TR> <TD align="center" width="100%"> <TABLE border=0 cellspacing=0 cellpadding=1 class="uni" WIDTH=670 background="/pirwww/images/uni_bg.gif"> <TR> <TD rowspan=2><A HREF="http://www.uniprot.org" TARGET="_BLANK"><img alt='uniprot' src="/pirwww/images/uni_logo.png" border=0></A></TD> <td width=14 rowspan=2></td> <TD class="nrm11" align="left" colspan=3>The Universal Protein Resource (UniProt) provides the scientific community with a single, centralized, authoritative resource for protein sequences and functional information. </TD> <td width=4 background="/pirwww/images/uni_bg.gif"></td> </TR> <tr> <TD nowrap> <a href="http://www.uniprot.org/help/uniprotkb" target="_blank" class='footerMenu3'>UniProtKB<a/> | <a href="http://www.uniprot.org/help/uniref" target="_blank" class='footerMenu3'>UniRef</a> | <a href="http://www.uniprot.org/help/uniparc" target="_blank" class='footerMenu3'>UniParc</a><img alt='' src="/pirwww/images/spacer.gif" width="206" height="2"></td> <TD nowrap> <IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10 align=middle></td> <TD nowrap> <small> <font color="#336699">Current release: 2024_05 </font></small></td> <TD nowrap> <IMG alt='' src="/pirwww/images/spacer.gif" width=10 border=0 height=10 align=middle></td> </TD> </TR> </TABLE> </TD> </TR> <!-- Showcase --> <TR> <TD align="center" width="100%" nowrap> <TABLE cellspacing=0 cellpadding=10> <TR> <!-- PIRSF --> <TD valign=top align="right"> <!-- PIRSF starts --> <TABLE cellSpacing=0 cellPadding=0 width=210 border=0> <TBODY> <TR> <TD width=210 background="/pirwww/images/temp/bgd025(210).png"><A href="https://proconsortium.org/pro.shtml"><IMG height=40 alt='Protein Ontology' src="/pirwww/images/3_cpnt_pro.png" width=210 border=0></A></TD> </TR> <TR> <TD width=210><A href="https://proconsortium.org/pro.shtml"><IMG height=80 alt='Protein Ontology' src="/pirwww/images/zz.jpg" width=210 border=0></A></TD> </TR> <TR> <TD class=ad01 vAlign=top background="/pirwww/images/temp/bgd025(210).png" bgColor=#ebeeef> <TABLE class=nrm02 cellSpacing=0 cellPadding=4 border=0> <TBODY> <TR> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD> Representation of protein objects with descriptions and relationships </TD> </TR> <tr><TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD><td> <a href='https://proconsortium.org/cgi-bin/browser_pro?id=PRO:000000001'>Browse PRO</a></td></tr> </TR><TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD><td> Annotate with <a href="https://proconsortium.org/cgi-bin/race_pro">RACE-PRO</a></td></tr> <TR><td></td><TD><IMG alt='' src="/pirwww/images/spacer.gif" width=1 height=3></TD></TR> <TR><td></td><TD><IMG alt='' src="/pirwww/images/spacer.gif" width=10 height=11></TD></TR> <TR><TD colspan=2> *<a href="https://proconsortium.org/cgi-bin/entry_pro?id=PR:000025934">Sample PRO report</a>* </TD></tr> </TBODY> </TABLE> </TD> </TR> <TR> <TD bgColor=#ebeeef><IMG height=11 alt='' src="/pirwww/images/temp/pic070(purple).png" width=210></TD> </TR></TBODY></TABLE> <!-- PIRSF ends --> </TD> <!-- iPTM --> <TD align="center" valign="top"> <!-- iPTM starts --> <TABLE cellSpacing=0 cellPadding=0 width=210 border=0> <TBODY> <TR> <TD width=210 background="/pirwww/images/temp/bgd025(210).png"><A href="http://research.bioinformatics.udel.edu/iptmnet/"><IMG height=40 alt=iProClassBanner src="/pirwww/images/iptm_head0.png" width=210 border=0></A></TD> </TR> <TR> <TD width=210><A href="http://research.bioinformatics.udel.edu/iptmnet/"><IMG height=80 alt=iProClassUniverse src="/pirwww/t41.png" width=210 border=0></A></TD> </TR> <TR> <TD class=ad01 vAlign=top background="/pirwww/images/temp/bgd025(210).png" bgColor=#ebeeef> <TABLE class=nrm02 cellSpacing=0 cellPadding=4 border=0> <TR> <TR> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD>PTM enzyme-substrate-site relations</TD> </TR> <TR> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD>Visual analysis of PTM networks, cross-talks, and conservation</TD> </TR> <TR> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD><a Href="http://research.bioinformatics.udel.edu/iptmnet/search_bulk">Batch Retrieval</TD> </TR> <TR> <td></td><TD><IMG alt='' src="/pirwww/images/spacer.gif" width=10 height=6></TD> </TR> <TR> <TD colspan=2> *<a href="http://research.bioinformatics.udel.edu/iptmnet/entry/Q15796/">Sample iPTMnet report</a>*</TD> </tr> </TABLE> </TD> </TR> <TR> <TD bgColor=#ebeeef><IMG height=11 alt='' src="/pirwww/images/temp/pic070(green).png" width=210></TD> </TR> </TBODY></TABLE> <!-- iProClass ends --> </TD> <!-- iProLINK --> <TD valign=top align="left"> <!-- iProLINK starts --> <TABLE cellSpacing=0 cellPadding=0 width=210 border=0> <TBODY> <TR> <TD width=210 background="/pirwww/images/temp/bgd025(210).png"><A href="/pirwww/iprolink/"><IMG height=40 alt=iProLINKBanner src="/pirwww/images/3_cpnt_iprolink.png" width=210 border=0></A></TD> </TR> <TR> <TD width=210><A href="http://research.bioinformatics.udel.edu/iprolink/"><IMG height=80 alt=iProLINKIllustrated src="/pirwww/images/temp/ipl/iProLINK.png" width=210 border=0></A></TD> </TR> <TR> <TD class=ad01 vAlign=top background="/pirwww/images/temp/bgd025(210).png" bgColor=#ebeeef> <TABLE class=nrm02 cellSpacing=0 cellPadding=4 border=0> <TR> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD>Access to text mining tools and annotated corpora<br></TD> </TR> <tr><TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD><a href="/rlimsp/">RLIMS-P</a> extraction of kinase, substrate and site</a></TD> </TR> <TR> <TD valign="top"><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD>miRtex extraction of miRNA/target information</td></tr> <TR><td></td><TD><IMG alt='' src="/pirwww/images/spacer.gif" width=10 height=6></TD></TR> <TR><TD colspan=2> *<a href=" http://research.bioinformatics.udel.edu/rlimsp/view.php?s=1759&abs=0#EvidenceView?pmid=11353545">Sample RLIMS-P report</a>*</TD></TR> </TBODY> </TABLE> </TD> </TR> <TR> <TD bgColor=#ebeeef><IMG height=11 alt='' src="/pirwww/images/temp/ipl/pic070(gold).png" width=210></TD> </TR> </TBODY></TABLE> <!-- iProLINK ends --> </TD> </TR> <TR> <!-- new Resources --> <!-- Other resource begins --> <TD align="left" valign="top" colspan=3> <table border=0 cellspacing=0 cellpadding=0 class="uni" WIDTH=670 > <tr><td> <table border=0 cellSpacing=0 cellPadding=0> <tr><td> <TABLE cellSpacing=0 cellPadding=0 width=210 align=center border=0> <TR> <TD> <TABLE cellSpacing=0 cellPadding=0 width=210 border=0 class="nrm11"> <TR><TH bgColor=#42B0E5><img src="/pirwww/images/spacer.gif" width=2 height=1></th><th bgColor=#42B0E5><font color="ffffff"><b>O</b></font></th> <TH bgColor=#42B0E5><img src="/pirwww/images/spacer.gif" width=3 height=1></th> <TH bgColor=#8b98a9 height=19 align="left"><font color="ffffff"> OTHER RESOURCE</font></TH> <TD bgcolor="#8b98a9" align=middle width=18> </TD> <TD bgcolor="#8b98a9" width=5> </TD></TR></TABLE></TD></TR> </TABLE> </td> <!-- Other Resource ends --> <!-- PEPTIDE SEARCH begins --> <TD > <TABLE class=nrm11 cellSpacing=0 cellPadding=1 border=0 width=210> <TR><td><img alt='' src="/pirwww/images/spacer.gif" width="40" height="3"></td> <TD valign="top" align=right><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <!--<TD><a href="/rps">Representative Proteome</a></TD>--> <TD><a href="/rps">Reference Proteomes</a></TD> </TR> </TABLE> </td> <!-- PEPTIDE SEARCH ends --> <!-- TEXT SEARCH begins --> <TD > <TABLE class=nrm11 cellSpacing=0 cellPadding=1 border=0 width=210> <TR> <TD valign="top" align=right><img alt='' src="/pirwww/images/spacer.gif" width="2" height="3"><br><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10></TD> <TD><a href="/resid/">RESID</a></TD> </TR> </TABLE> </TD> <!-- TEXT SEARCH ends --> </tr></table> </td></tr></table> </td></tr> <TR> <TD width="100%" colspan=3> <TABLE cellspacing=0 cellpadding=1 border=0> <TR><TD class="nrm11" nowrap><IMG alt='' src="/pirwww/images/spacer.gif" width=80 height=1><b><font color='#003366'>Bioinformatics & Computational Biology Graduate Programs:</font></b> <br><IMG alt='' src="/pirwww/images/spacer.gif" width=90 height=20><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10> <i><a href="http://bioinformatics.georgetown.edu/" target=new>MS program at Georgetown University</a> <br><IMG alt='' src="/pirwww/images/spacer.gif" width=90 height=15><IMG alt='' src="/pirwww/images/temp/orangeDot.gif" width=10 height=10> <a href="http://bioinformatics.udel.edu/Education" target=new>PhD, MS, PSM and Graduate Certificate programs at University of Delaware</a></i><br><br> </td></tr></TABLE> </td></TR></TABLE> </TD></TR></TABLE> </TD> <TD width=99%> </TD></TR></TABLE> <!-- YOUR CONTENT ends. --> <!-- ############## end of page dependent block--> <!-- ############## end of page dependent block--> <!-- This is a second half of body frame. The first half is in half_frame_close.inc"--> </TD> <TD width=100% background="/pirwww/images/temp/bg02.gif" align=right bgcolor='#ffffff'><img src="/pirwww/images/spacer.gif" width="1" height="1" alt=''></TD> </TR> </TABLE> <!-- FOOTER --> <TABLE cellspacing=0 cellpadding=0 width="100%" bgcolor="#eeeeee" border=0 class=nrm02> <TBODY> <TR> <TD align="center" valign="middle" nowrap bgcolor=#71a1cf> <img src="/pirwww/images/pirlogo2.png" alt="PIR"> </TD> <TD align="left" valign="top"> <TABLE background="/pirwww/images/spacer.gif" width="686" border=0 cellPadding=3 cellSpacing=0 class=nrm02> <TBODY> <TR> <TD align="left" valign=bottom nowrap> <a href="/" class='footerMenu'>Home</a> | <a href="/pirwww/about/" class='footerMenu'>About PIR</a> | <a href="/pirwww/dbinfo" class='footerMenu'>Databases</a> | <a href="/pirwww/search/" class='footerMenu'>Search/Analysis</a> | <a href="/pirwww/download/" class='footerMenu'>Download</a> | <a href="/pirwww/support/" class='footerMenu'>Support</a> </TD> <TD align="right" valign=bottom nowrap class=nrm01> <a href="/pirwww/support/sitemap.shtml" class='footer'>SITE MAP</a> | <a href="/pirwww/about/linkpir.shtml" class='footer'>TERMS OF USE</a> </TD> </TR> <TR> <TD colspan="2" align="center" nowrap class="footer3"><span class=nrm10><FONT color=#999999> ©2018</FONT></sapn> <img src="/pirwww/images/spacer.gif" alt="" width=20 height=1> <b><a href="/" >Protein Information Resource</a></b> <img src="/pirwww/images/spacer.gif" alt="" width=105 height=1></TD> </TR> <TR><TD colspan="2" nowrap><table border=0 cellPadding=2 cellSpacing=0 class=nrm02 width=100%> <tr><td><img src="/pirwww/images/spacer.gif" alt="" width=50 height=1></td> <TD nowrap align="center" class=footer><a href='http://bioinformatics.udel.edu' target="_blank"><FONT color=#999999>University of Delaware</font></a> <br><FONT color=#999999>590 Avenue 1743, Suite 147 <br>Newark, DE 19711, USA</FONT></TD> <td><img src="/pirwww/images/spacer.gif" alt="" width=20 height=1></td> <TD nowrap align="center" class=footer><a href='http://gumc.georgetown.edu' target="_blank" ><FONT color=#999999>Georgetown University Medical Center</font></a> <br><FONT color=#999999>2115 Wisconsin Ave NW, G1 level, Suite 040A <br>Washington, DC 20007, USA</FONT></TD> </tr></table></td> </TR> </TBODY> </TABLE></TD> <TD width="99%" > </TD> </TR> </TBODY> </TABLE> </td></tr></table> </body> <!-- Menu Related --> <!-- <LINK href="/pirwww/menu/milo.css" type=text/css rel=stylesheet> --> <SCRIPT language=javascript src="/pirwww/menu/milonic_src.js" type="text/javascript"></SCRIPT> <SCRIPT language=javascript> if(ns4) _d.write("<scr"+"ipt language=JavaScript src=/pirwww/menu/mmenuns4.js><\/scr"+"ipt>"); else _d.write("<scr"+"ipt language=JavaScript src=/pirwww/menu/mmenudom.js><\/scr"+"ipt>"); </SCRIPT> <SCRIPT language=javascript src="/pirwww/menu/menu_data.js" type="text/javascript"></SCRIPT> <SCRIPT language=JavaScript src="/pirwww/menu/tooltips.js" type="text/javascript"></SCRIPT> <!-- Menu Related ends --> <script type="text/javascript"> var gaJsHost = (("https:" == document.location.protocol) ? "https://ssl." : "http://www."); document.write(unescape("%3Cscript src='" + gaJsHost + "google-analytics.com/ga.js' type='text/javascript'%3E%3C/script%3E")); </script> <script type="text/javascript"> var pageTracker = _gat._getTracker("UA-4232355-1"); pageTracker._initData(); pageTracker._trackPageview(); </script>