Bioconductor - Dashboard

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<li>Dashboard</li> </ul> <style type="text/css"> SPAN.TIMEOUT { background: #A08; font-weight: bold; color: white; } SPAN.ERROR { background: #B33; font-weight: bold; color: white; } SPAN.WARNINGS { background: #D82; font-weight: bold; color: white; } SPAN.OK { background: #282; font-weight: bold; color: #DDD; } </style> <h1 class="format-bold">Dashboard</h1> <a id="top"></a> <div> <p>This page was built <abbr class="timeago" title="2024-11-30T15:05:02Z"> 2024-11-30T15:05:02Z</abbr>.</p> </div> <div> <h3 class="format-bold">Quick Links</h3> <ol> <li><a href="#build_system_status">Build System Status</a></li> <li><a href="#recent_commits">Recent Commits To Git</a></li> <li><a href="#newest_packages">Newly Accepted Packages</a></li> <li><a href="#spb">Single Package Builder Activity</a></li> <li><a href="#recent_support_site">Support Site Activity</a></li> <li><a href="#mirror_status">Mirror Status</a></li> </ol> </div> <div class="page-container"> <a id="build_system_status"></a> <section> <h2><a href="/checkResults/">Build System Status</a></h2> <p>Legend: <span class="TIMEOUT"> TIMEOUT </span> <span class="ERROR"> ERROR </span> <span class="WARNINGS"> WARNINGS </span> <span class="OK"> OK </span> </p> <p><br></p> </section> <section> <h4>Release</h4> <p><a class="text-large format-bold" href="/checkResults/release/bioc-LATEST/">Software</a></p> <iframe src="/dashboard/build_release_bioc.html" width="80%", height=200></iframe> <p> </p> <p><a class="text-large format-bold" href="/checkResults/release/data-experiment-LATEST/">Experiment Data</a></p> <iframe src="/dashboard/build_release_data-experiment.html" width="80%", height=200></iframe> <p> </p> <p><a class="text-large format-bold" href="/checkResults/release/workflows-LATEST/">Workflows</a></p> <iframe src="/dashboard/build_release_workflows.html" width="80%", height=200></iframe> <p> </p> </section> <section> <h4>Devel</h4> <p><a class="text-large format-bold" href="/checkResults/devel/bioc-LATEST/">Software</a></p> <iframe src="/dashboard/build_devel_bioc.html" width="80%", height=200></iframe> <p> </p> <p><a class="text-large format-bold" href="/checkResults/devel/data-experiment-LATEST/">Experiment Data</a></p> <iframe src="/dashboard/build_devel_data-experiment.html" width="80%", height=200></iframe> <p> </p> <p><a class="text-large format-bold" href="/checkResults/devel/workflows-LATEST/">Workflows</a></p> <iframe src="/dashboard/build_devel_workflows.html" width="80%", height=200></iframe> <p> </p> </section> <a id="recent_commits"></a> <a href="#top" style="font-size: small; float: right; text-align: right">Back to top</a> <hr class="page-divider" /> <section> <h2>Recent Commits</h2> <div style="float:left;width:50%;"> <p>Last 10 commit to Bioconductor <b>release</b>: <table> <tr><td><a href=https://bioconductor.org/packages/edgeR/>edgeR</a></td><td>2024-11-30 17:52:06 +1100</td></tr><tr><td><a href=https://bioconductor.org/packages/enrichplot/>enrichplot</a></td><td>2024-11-29 22:44:41 +0800</td></tr><tr><td><a href=https://bioconductor.org/packages/clusterProfiler/>clusterProfiler</a></td><td>2024-11-29 22:32:11 +0800</td></tr><tr><td><a href=https://bioconductor.org/packages/CATALYST/>CATALYST</a></td><td>2024-11-28 22:45:12 +0100</td></tr><tr><td><a href=https://bioconductor.org/packages/Prostar/>Prostar</a></td><td>2024-11-28 07:50:17 +0100</td></tr><tr><td><a href=https://bioconductor.org/packages/mitch/>mitch</a></td><td>2024-11-28 16:06:31 +1100</td></tr><tr><td><a href=https://bioconductor.org/packages/escape/>escape</a></td><td>2024-11-27 14:36:31 -0600</td></tr><tr><td><a href=https://bioconductor.org/packages/GenomeInfoDb/>GenomeInfoDb</a></td><td>2024-11-27 07:00:40 -0800</td></tr><tr><td><a href=https://bioconductor.org/packages/mCSEA/>mCSEA</a></td><td>2024-11-27 13:10:05 +0100</td></tr><tr><td><a href=https://bioconductor.org/packages/multicrispr/>multicrispr</a></td><td>2024-11-27 09:22:03 +0100</td></tr></table> </p> </div> <div style="float:right;width:50%;"> <p>Last 10 commit to Bioconductor <b>devel</b>: <table> <tr><td><a href=https://bioconductor.org/packages/devel/edgeR/>edgeR</a></td><td>2024-11-30 17:39:51 +1100</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/DECIPHER/>DECIPHER</a></td><td>2024-11-29 15:42:57 -0500</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/HDF5Array/>HDF5Array</a></td><td>2024-11-29 12:14:58 -0800</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/TBSignatureProfiler/>TBSignatureProfiler</a></td><td>2024-11-29 11:54:40 -0500</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/clusterProfiler/>clusterProfiler</a></td><td>2024-11-29 22:35:31 +0800</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/OpenStats/>OpenStats</a></td><td>2024-11-29 13:19:13 +0000</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/CATALYST/>CATALYST</a></td><td>2024-11-28 22:46:45 +0100</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/Moonlight2R/>Moonlight2R</a></td><td>2024-11-28 17:09:48 +0100</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/EnrichDO/>EnrichDO</a></td><td>2024-11-28 11:59:18 +0800</td></tr><tr><td><a href=https://bioconductor.org/packages/devel/fobitools/>fobitools</a></td><td>2024-11-27 15:48:53 -0600</td></tr></table> </p> </div> </section> <a id="newest_packages"></a> <a href="#top" style="font-size: small; float: right; text-align: right">Back to top</a> <hr class="page-divider" /> <section> <h2>Newest Packages</h2> <div style="float:left;width:50%;"> <h6>Software Packages</h6> <p> <table> <tr><td> MotifPeeker </td></tr> <tr><td> visiumStitched </td></tr> <tr><td> mspms </td></tr> <tr><td> SplineDV </td></tr> <tr><td> TMSig </td></tr> <tr><td> HuBMAPR </td></tr> <tr><td> DFplyr </td></tr> <tr><td> MOSClip </td></tr> <tr><td> immApex </td></tr> <tr><td> OmicsMLRepoR </td></tr> </table> </p> </div> <div style="float:right;width:50%;"> <h6>Experiment Data Packages</h6> <p> <table> <tr><td> eoPredData </td></tr> <tr><td> ProteinGymR </td></tr> <tr><td> CoSIAdata </td></tr> <tr><td> LegATo </td></tr> <tr><td> EpipwR.data </td></tr> <tr><td> bugphyzz </td></tr> <tr><td> homosapienDEE2CellScore </td></tr> <tr><td> JohnsonKinaseData </td></tr> <tr><td> CytoMethIC </td></tr> <tr><td> TransOmicsData </td></tr> </table> </p> </div> </section> <a id="spb"></a> <a href="#top" style="font-size: small; float: right; text-align: right">Back to top</a> <hr class="page-divider" /> <section> <h2>Single Package Builder</h2> <a href="https://github.com/Bioconductor/Contributions/issues">All Current Submissions</a> <p></p> <div style="float:left;width:50%;"> Recent Submissions <br> <table> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3666>Site2Target</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3661>anglemania</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3659>OmicGsea R package submission</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3657>TCMC</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3653>biocmake</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3651>beachmat.tiledb</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3650>alabaster.sfe</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3649>scHiCcompare</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3647>mist</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3643>maaslin3</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3637>miaDash</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3634>linkSet</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3631>ELViS</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3629>shinyDSP</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3627>TaxSEA</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3623>G4SNVHunter</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3622>XeniumIO</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3620>RUCova</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3618>poem</a></td></tr> <tr><td><a href=https://github.com/Bioconductor/Contributions/issues/3615>terapadog</a></td></tr> </table> </div> <div style="float:right;width:50%;"> Recent Builds <table> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21300">MetaboDynamics</a></td> <td><abbr class="timeago" title="2024-11-29T17:48:01">2024-11-29T17:48:01</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21299">BulkSignalR</a></td> <td><abbr class="timeago" title="2024-11-29T14:09:58">2024-11-29T14:09:58</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21298">linkSet</a></td> <td><abbr class="timeago" title="2024-11-29T07:56:20">2024-11-29T07:56:20</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21297">jazzPanda</a></td> <td><abbr class="timeago" title="2024-11-29T07:13:32">2024-11-29T07:13:32</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21296">jazzPanda</a></td> <td><abbr class="timeago" title="2024-11-29T05:42:33">2024-11-29T05:42:33</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21295">ReducedExperiment</a></td> <td><abbr class="timeago" title="2024-11-28T10:49:53">2024-11-28T10:49:53</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21294">linkSet</a></td> <td><abbr class="timeago" title="2024-11-28T06:27:06">2024-11-28T06:27:06</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21293">clustSIGNAL</a></td> <td><abbr class="timeago" title="2024-11-28T01:06:28">2024-11-28T01:06:28</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21292">clustSIGNAL</a></td> <td><abbr class="timeago" title="2024-11-28T00:11:22">2024-11-28T00:11:22</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21291">probeSNPffer</a></td> <td><abbr class="timeago" title="2024-11-28T00:06:06">2024-11-28T00:06:06</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21290">probeSNPffer</a></td> <td><abbr class="timeago" title="2024-11-27T23:07:42">2024-11-27T23:07:42</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21289">probeSNPffer</a></td> <td><abbr class="timeago" title="2024-11-27T22:47:08">2024-11-27T22:47:08</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21287">mist</a></td> <td><abbr class="timeago" title="2024-11-27T20:06:30">2024-11-27T20:06:30</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21286">maaslin3</a></td> <td><abbr class="timeago" title="2024-11-27T19:59:55">2024-11-27T19:59:55</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21285">linkSet</a></td> <td><abbr class="timeago" title="2024-11-27T19:57:04">2024-11-27T19:57:04</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21284">ELViS</a></td> <td><abbr class="timeago" title="2024-11-27T19:49:54">2024-11-27T19:49:54</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21283">probeSNPffer</a></td> <td><abbr class="timeago" title="2024-11-27T19:41:21">2024-11-27T19:41:21</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21282">jazzPanda</a></td> <td><abbr class="timeago" title="2024-11-27T19:41:11">2024-11-27T19:41:11</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21281">TENET</a></td> <td><abbr class="timeago" title="2024-11-27T19:40:58">2024-11-27T19:40:58</abbr></td> </tr> <tr> <td><a href="http://staging.bioconductor.org:8000/job/21288">mist</a></td> <td><abbr class="timeago" title="2024-11-27T15:33:25">2024-11-27T15:33:25</abbr></td> </tr> </table> </div> </section> <a id="recent_support_site"></a> <a href="#top" style="font-size: small; float: right; text-align: right">Back to top</a> <hr class="page-divider" /> <div style="float:left;width:50%;"> <div style="padding:0 12px 0 0"> <h2 style="min-height:40px;"> <img height="36" width="37" src="/images/icons/help.gif" alt=""/> <a href="https://support.bioconductor.org/">Support</a> </h2> <ul> <li>Read the <a href="/help/support/posting-guide/">posting guide</a></li> <li><a href="/help/support/#bioc-devel">bioc-devel mailing list (for package authors)</a></li> </ul> <div class="grey_box"> <a href="https://support.bioconductor.org/p/9160705/#9160725" title="Comment: What type of counts data to import for performing Isoform analysis in edgeR"> <b>Comment: What type of counts data to ...</b></a><br/> <abbr class="timeago" title="2024-11-30T03:30:08Z"> 2024-11-30T03:30:08Z</abbr> </div> <div class="white_box"> <a href="https://support.bioconductor.org/p/9160719/#9160724" title="Comment: Differential Expression Genes as Independent Variables"> <b>Comment: Differential Expression Gene...</b></a><br/> <abbr class="timeago" title="2024-11-30T03:19:47Z"> 2024-11-30T03:19:47Z</abbr> </div> <div class="grey_box"> <a href="https://support.bioconductor.org/p/9160719/#9160723" 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