<!DOCTYPE html> <html lang="en"> <head> <link rel='stylesheet' href="/js/3.46.3/p3/resources/p3.css" /> <link rel='stylesheet' href="/js/3.46.3/heatmap/dist/hotmap.css" /> <meta http-equiv="Content-Type" content="text/html; charset=utf-8"/> <meta name="Keywords" content="BV-BRC, Bacterial and Viral Bioinformatics Resource Center"/> <meta name="viewport" content="width=device-width, initial-scale=1"> <meta name="google-site-verification" content="TkjceNtwo7upCQl_gx8Zmhhp9tCmc08LitZGuvQ1Eb8" /> <link rel="manifest" href="/public/manifest.json"> <link rel="icon" sizes="16x16 32x32" href="/favicon.ico"> <link href="https://fonts.googleapis.com/css2?family=Roboto+Slab:wght@300;400&family=Roboto:wght@300;400;700&display=swap" rel="stylesheet"> </head> <body onunload="" class="claro patric "> <div id="ApplicationContainer" data-dojo-type="dijit/layout/BorderContainer" class="layoutContainer" data-dojo-props="id:'ApplicationContainer',gutters:false,liveSplitters:false"> <div data-dojo-type="dijit/layout/ContentPane" class="HeaderBar" data-dojo-props="region:'top'"> <div id="bv-brc-header" role="heading" aria-level="1"> <div id="bv-brc-header-container"> <div class="nav-logo"> <a class="nav-logo-link" href="/"> <img class="bv-brc-logo" src="/patric/images/bv-brc/bv-brc-header-logo.png" alt="BV-BRC Logo" style="height: 28px;"/> <span><i style="color: #ffffff; font-size: 12px; padding-left: 2px;">3.46.3 </i></span> </a> </div> <div id="header-menu"> <div class="topMenuButton showOnLoad dijitHidden" data-dojo-type="dijit/form/DropDownButton"> <span>ORGANISMS</span> <div data-dojo-type="p3/widget/TooltipDialog"> <div style="vertical-align: top;width:225px;display:inline-block;margin-right: 5px;"> <div class="menuHeader">Bacterial Pathogens</div> <div class="menuItems"> <div> <span class="menuItem half"> <a class="" href="/view/Taxonomy/469#view_tab=overview" title="Acinetobacter overview">Acinetobacter</a> </span> <span class="menuItem half"> <a class="" title="Francisella overview" href="/view/Taxonomy/262#view_tab=overview">Francisella</a> </span> </div> <div> <span class="menuItem half"> <a class="" href="/view/Taxonomy/1386#view_tab=overview" title="Bacillus overview">Bacillus</a> </span> <span class="menuItem half"> <a class="" title="Helicobacter overview" href="/view/Taxonomy/209#view_tab=overview">Helicobacter</a> </span> </div> <div> <span class="menuItem half"> <a class="" href="/view/Taxonomy/773#view_tab=overview" title="Bartonella overview">Bartonella</a> </span> <span class="menuItem half"> <a class="" title="Listeria overview" href="/view/Taxonomy/1637#view_tab=overview">Listeria</a> </span> </div> <div> <span class="menuItem half"> <a class="" href="/view/Taxonomy/64895#view_tab=overview" title="Borreliella overview">Borreliella</a> </span> <span class="menuItem half"> <a class="" title="Mycobacterium overview" href="/view/Taxonomy/1763#view_tab=overview">Mycobacterium</a> </span> </div> <div> <span class="menuItem 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top;width:341px;display:inline-block;margin-right: 5px;"> <div class="menuHeader">Viral Families</div> <div class="menuItems"> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/10508#view_tab=overview" title="Adenoviridae overview">Adenoviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Orthomyxoviridae overview" href="/view/Taxonomy/11308#view_tab=overview">Orthomyxoviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/137992#view_tab=overview" title="Asfarviridae overview">Asfarviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Paramyxoviridae overview" href="/view/Taxonomy/11158#view_tab=overview">Paramyxoviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/1980410#view_tab=overview" title="Bunyavirales overview">Bunyavirales</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Parvoviridae overview" href="/view/Taxonomy/10780#view_tab=overview">Parvoviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/11974#view_tab=overview" title="Caliciviridae overview">Caliciviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Picornaviridae overview" href="/view/Taxonomy/12058#view_tab=overview">Picornaviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/11118#view_tab=overview" title="Coronaviridae overview">Coronaviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Pneumoviridae overview" href="/view/Taxonomy/11244#view_tab=overview">Pneumoviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/11266#view_tab=overview" title="Filoviridae overview">Filoviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Polyomaviridae overview" href="/view/Taxonomy/151341#view_tab=overview">Polyomaviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/11050#view_tab=overview" title="Flaviviridae overview">Flaviviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Poxviridae overview" href="/view/Taxonomy/10240#view_tab=overview">Poxviridae</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/10404#view_tab=overview" title="Hepadnaviridae overview">Hepadnaviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Reovirales overview" href="/view/Taxonomy/2732541#view_tab=overview">Reovirales</a> </span> </div> <div> <span class="menuItem half"> <a class="navigationLink" href="/view/Taxonomy/291484#view_tab=overview" title="Hepeviridae overview">Hepeviridae</a> </span> <span class="menuItem half"> <a class="navigationLink" 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overview">Hepacivirus</a> </span> <span class="menuItem half"> <a class="navigationLink" title="Zika virus overview" href="/view/Taxonomy/64320#view_tab=overview">Zika virus</a> </span> </div> </div> </div> </div> </div> <div class="topMenuButton showOnLoad dijitHidden" data-dojo-type="dijit/form/DropDownButton"> <span>SEARCHES</span> <div data-dojo-type="p3/widget/TooltipDialog"> <div class="menuHeader" style="padding-right: 20px;">Advanced Search</div> <div><a class="navigationLink" href="/searches/TaxaSearch">Taxa</a></div> <div><a class="navigationLink" href="/searches/GenomeSearch">Genomes</a></div> <div><a class="navigationLink" href="/searches/StrainSearch">Strains</a></div> <div><a class="navigationLink" href="/searches/GenomicFeatureSearch">Features</a></div> <div><a class="navigationLink" href="/searches/ProteinSearch">Proteins</a></div> <div><a class="navigationLink" href="/searches/SpecialtyGeneSearch">Specialty Genes</a></div> <div><a class="navigationLink" href="/searches/DomainAndMotifSearch">Domains and Motifs</a></div> <div><a class="navigationLink" href="/searches/EpitopeSearch">Epitopes</a></div> <div><a class="navigationLink" href="/searches/ProteinStructureSearch">Protein Structures</a></div> <div><a class="navigationLink" href="/searches/PathwaySearch">Pathways</a></div> <div><a class="navigationLink" href="/searches/SubsystemSearch">Subsystems</a></div> <div><a class="navigationLink" href="/searches/SurveillanceSearch">Surveillance</a></div> <div><a class="navigationLink" href="/searches/SerologySearch">Serology</a></div> <div><a class="navigationLink" href="/searches/SFVTSearch">Sequence Feature Variant Types</a></div> </div> </div> <div class="topMenuButton showOnLoad dijitHidden" data-dojo-type="dijit/form/DropDownButton"> <span>TOOLS & SERVICES</span> <div data-dojo-type="p3/widget/TooltipDialog"> <div> <div style="vertical-align: top;width:250px;margin-right:5px;display:inline-block"> <div class="menuHeader">Genomics</div> <div class="menuItems"> <div><a class="navigationLink" href="/app/Assembly2">Genome Assembly</a></div> <div><a class="navigationLink" href="/app/Annotation">Genome Annotation</a></div> <div><a class="navigationLink" href="/app/ComprehensiveGenomeAnalysis">Comprehensive Genome Analysis <span style="font-style: italic;">(B)</span></a></div> <div><a class="navigationLink" href="/app/Homology">BLAST</a></div> <div><a class="navigationLink" href="/app/PrimerDesign">Primer Design</a></div> <div><a class="navigationLink" href="/app/GenomeDistance">Similar Genome Finder</a></div> <div><a class="navigationLink" href="/app/GenomeAlignment">Genome Alignment</a></div> <div><a class="navigationLink" href="/app/Variation">Variation Analysis</a></div> <div><a class="navigationLink" href="/app/Tnseq">Tn-Seq Analysis</a></div> </div> <div class="menuHeader">Phylogenomics</div> <div class="menuItems"> <div><a class="navigationLink" href="/app/PhylogeneticTree">Bacterial Genome Tree</a></div> <div><a 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href="/app/SequenceSubmission">Influenza Sequence Submission</a></div> <div><a class="navigationLink" href="/app/HASubtypeNumberingConversion">Influenza HA Subtype Conversion</a></div> <div><a class="navigationLink" href="/app/SubspeciesClassification">Subspecies Classification</a></div> <div><a class="navigationLink" href="/app/ViralAssembly">Viral Assembly</a></div> </div> <p></p> <div class="menuHeader">Outbreak Tracker</div> <div class="menuItems"> <div><b><a class="navigationLink" href="/outbreaks/Mpox/#view_tab=overview">Mpox 2024</a></b></div> <div><b><a class="navigationLink" href="/outbreaks/H5N1/#view_tab=overview">Influenza H5N1 2024</a></b></div> <div><b><a class="navigationLink" href="/outbreaks/SARSCoV2/#view_tab=overview">SARS-CoV-2</a></b></div> </div> </div> </div> </div> </div> <div class="topMenuButton showOnLoad dijitHidden" data-dojo-type="dijit/form/DropDownButton"> <span>WORKSPACES</span> <div data-dojo-type="p3/widget/TooltipDialog"> <div> <div 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