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All rights reserved. Background image by Spencer Phillips</div> </aside> <aside id="eu_cookie_law_widget-2" class="widget widget_eu_cookie_law_widget"> <div class="hide-on-button" data-hide-timeout="30" data-consent-expiration="365" id="eu-cookie-law" > <form method="post"> <input type="submit" value="Close and accept" class="accept" /> </form> This website requires cookies, and the limited processing of your personal data in order to function. By using the site you are agreeing to this as outlined in our <a href="https://www.ebi.ac.uk/data-protection/ensembl/privacy-notice" rel=""> Privacy Policy </a> </div> </aside> </div> </div> </div> <div id="primary" class="content-area col-lg-9" itemprop="mainContentOfPage"> <div id="content" class="site-content" role="main"> <article itemscope itemtype="http://schema.org/Article" id="post-15780" class="post-15780 post type-post status-publish format-standard sticky hentry category-01-release tag-ensembl tag-ensembl-genomes tag-rapid tag-rapid-release tag-release"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/11/14/we-will-be-freezing-ensembl-rapid-release/" title="Permalink to We have frozen Ensembl Rapid Release" rel="bookmark">We have frozen Ensembl Rapid Release</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/11/14/we-will-be-freezing-ensembl-rapid-release/" rel="bookmark"><time class="entry-date published" datetime="2024-11-14T16:40:07+00:00" itemprop="datepublished">14th November 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/jrocha/" rel="author" itemprop="url"><span itemprop="name">Jorge Batista da Rocha</span></a></span><span class="sep">·</span><span class="comments-link"><a href="https://www.ensembl.info/2024/11/14/we-will-be-freezing-ensembl-rapid-release/#respond" itemprop="discussionUrl">0 Comments</a></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>All Rapid Release data, including Release 65, has been uploaded into the new Ensembl Beta site. New genome data will only be released onto the <a href="https://beta.ensembl.org" data-type="link" data-id="https://beta.ensembl.org">Ensembl Beta site</a>.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/11/14/we-will-be-freezing-ensembl-rapid-release/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15776" class="post-15776 post type-post status-publish format-standard sticky hentry category-07-status tag-bioinformatics tag-biomart tag-ensembl tag-release"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/11/13/temporary-disruption-in-ensembl-biomart/" title="Permalink to Temporary disruption in Ensembl BioMart" rel="bookmark">Temporary disruption in Ensembl BioMart</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/11/13/temporary-disruption-in-ensembl-biomart/" rel="bookmark"><time class="entry-date published" datetime="2024-11-13T11:32:09+00:00" itemprop="datepublished">13th November 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/aleena/" rel="author" itemprop="url"><span itemprop="name">Aleena Mushtaq</span></a></span><span class="sep">·</span><span class="comments-link"><a href="https://www.ensembl.info/2024/11/13/temporary-disruption-in-ensembl-biomart/#respond" itemprop="discussionUrl">0 Comments</a></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>We are experiencing issues with Ensembl BioMart due to unforeseen errors. </p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/11/13/temporary-disruption-in-ensembl-biomart/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15700" class="post-15700 post type-post status-publish format-standard hentry category-01-release tag-archives tag-ensembl tag-ensembl-genomes tag-gene-annotation tag-genebuild tag-metazoa tag-plants tag-regulation tag-rest-api tag-variation"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/10/18/ensembl-113-has-been-released/" title="Permalink to Ensembl 113 has been released!" rel="bookmark">Ensembl 113 has been released!</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/10/18/ensembl-113-has-been-released/" rel="bookmark"><time class="entry-date published" datetime="2024-10-18T12:29:06+01:00" itemprop="datepublished">18th October 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/lpmirabueno/" rel="author" itemprop="url"><span itemprop="name">Louisse Paola Mirabueno</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Ensembl 113 has been released!</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>We are pleased to announce the release of Ensembl 113, and the corresponding release of Ensembl Genomes 60. This release brings major gene and regulatory feature annotation updates in <em>Homo sapiens</em> (Human) and <em>Mus musculus</em> (Mouse). We have updated existing genomes and added additional genomes across the different Ensembl sites, including livestock breeds in Ensembl, three new species in Ensembl Plants and 26 new species in Ensembl Metazoa. Can鈥檛 find the species you are looking for? Don鈥檛 forget that new and exciting genome assemblies and annotations are continuously added to <a href="https://rapid.ensembl.org/index.html" target="_blank" rel="noreferrer noopener">Ensembl Rapid Release</a>!</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/10/18/ensembl-113-has-been-released/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15617" class="post-15617 post type-post status-publish format-standard hentry category-01-release tag-ensembl tag-ensembl-97 tag-ensembl-genomes tag-ensembl-genomes-37 tag-ensembl-genomes-40 tag-ensembl-metazoa tag-ensembl-plants tag-ensembl-vep tag-metazoa tag-microarray tag-plants tag-regulation tag-rest-api tag-vep"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/08/13/whats-coming-in-ensembl-release-113-ensembl-genomes-60/" title="Permalink to What鈥檚 coming in Ensembl release 113 / Ensembl Genomes 60?" rel="bookmark">What鈥檚 coming in Ensembl release 113 / Ensembl Genomes 60?</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/08/13/whats-coming-in-ensembl-release-113-ensembl-genomes-60/" rel="bookmark"><time class="entry-date published" datetime="2024-08-13T10:49:07+01:00" itemprop="datepublished">13th August 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/lpmirabueno/" rel="author" itemprop="url"><span itemprop="name">Louisse Paola Mirabueno</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on What鈥檚 coming in Ensembl release 113 / Ensembl Genomes 60?</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>We expect to release Ensembl 113 and Ensembl Genomes 60 in <s>September</s> October 2024. Below is a list of updates that we are hoping to include in the upcoming release. However, please note that we cannot guarantee everything listed here will make it into the final release.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/08/13/whats-coming-in-ensembl-release-113-ensembl-genomes-60/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15608" class="post-15608 post type-post status-publish format-standard hentry category-02-ensembl-vep tag-bioinformatics tag-ensembl tag-variation tag-vep"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/08/09/cool-stuff-ensembl-vep-can-do-supporting-alternative-human-assemblies/" title="Permalink to Cool stuff Ensembl VEP can do: supporting alternative human assemblies" rel="bookmark">Cool stuff Ensembl VEP can do: supporting alternative human assemblies</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/08/09/cool-stuff-ensembl-vep-can-do-supporting-alternative-human-assemblies/" rel="bookmark"><time class="entry-date published" datetime="2024-08-09T08:22:00+01:00" itemprop="datepublished">9th August 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/aleena/" rel="author" itemprop="url"><span itemprop="name">Aleena Mushtaq</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Cool stuff Ensembl VEP can do: supporting alternative human assemblies</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>The Ensembl VEP command-line tool can annotate and filter variants called against the latest human assemblies, including the telomere-to-telomere assembly of the CHM13 cell line (T2T-CHM13). In this blog post, we provide examples of how to run Ensembl VEP with these new assemblies and list the additional annotations supported via plugins.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/08/09/cool-stuff-ensembl-vep-can-do-supporting-alternative-human-assemblies/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15581" class="post-15581 post type-post status-publish format-standard hentry category-05-community tag-annotation tag-bioinformatics tag-career tag-ensembl tag-havana tag-manual-annotation tag-manual-curation tag-teamsembl"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/07/31/getting-to-know-us-reham-from-ensembl-havana/" title="Permalink to Getting to know us: Reham from Ensembl Havana" rel="bookmark">Getting to know us: Reham from Ensembl Havana</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/07/31/getting-to-know-us-reham-from-ensembl-havana/" rel="bookmark"><time class="entry-date published" datetime="2024-07-31T14:23:26+01:00" itemprop="datepublished">31st July 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/lpmirabueno/" rel="author" itemprop="url"><span itemprop="name">Louisse Paola Mirabueno</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Getting to know us: Reham from Ensembl Havana</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>In July, we talked to <a href="https://www.ebi.ac.uk/people/person/reham-fatima/" target="_blank" rel="noreferrer noopener">Reham Fatima</a>, a member of the Havana team. The Havana team carry out manual annotation on human, mouse, zebrafish and rat genomes. Reham has contributed to the MANE and GENCODE projects. Read more about Reham’s work at <a href="https://www.ebi.ac.uk/" target="_blank" rel="noreferrer noopener">EMBL-EBI</a> and what kind of cuisine she likes the most. You can also see some amazing photographs she has taken in her free time.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/07/31/getting-to-know-us-reham-from-ensembl-havana/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15569" class="post-15569 post type-post status-publish format-standard hentry category-02-updates tag-annotation tag-ensembl tag-ensembl-rapid-release tag-genebuild tag-havana tag-norway-rat tag-rat tag-rattus-norvegicus"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/07/19/updated-gene-annotation-for-rattus-norvegicus-norway-rat/" title="Permalink to Updated gene annotation for Rattus norvegicus (Norway rat)" rel="bookmark">Updated gene annotation for Rattus norvegicus (Norway rat)</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/07/19/updated-gene-annotation-for-rattus-norvegicus-norway-rat/" rel="bookmark"><time class="entry-date published" datetime="2024-07-19T10:53:11+01:00" itemprop="datepublished">19th July 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/lpmirabueno/" rel="author" itemprop="url"><span itemprop="name">Louisse Paola Mirabueno</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Updated gene annotation for Rattus norvegicus (Norway rat)</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>We have made updates to the <em>Rattus norvegicus</em> (Norway rat) gene annotation. The GRCr8 assembly is now the reference and mRatBN7.2 has been enhanced with manual annotation.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/07/19/updated-gene-annotation-for-rattus-norvegicus-norway-rat/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15545" class="post-15545 post type-post status-publish format-standard hentry category-05-community tag-bioinformatics tag-career tag-ensembl tag-ensembl-genomes tag-ensembl-plants tag-outreach tag-plants tag-teamsembl"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/06/28/getting-to-know-us-ian-tsang-visiting-phd-student/" title="Permalink to Getting to know us: Ian Tsang (visiting PhD student)" rel="bookmark">Getting to know us: Ian Tsang (visiting PhD student)</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/06/28/getting-to-know-us-ian-tsang-visiting-phd-student/" rel="bookmark"><time class="entry-date published" datetime="2024-06-28T11:34:40+01:00" itemprop="datepublished">28th June 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/lpmirabueno/" rel="author" itemprop="url"><span itemprop="name">Louisse Paola Mirabueno</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Getting to know us: Ian Tsang (visiting PhD student)</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>Meet visiting PhD student <a href="https://www.ebi.ac.uk/people/person/ian-tsang/" target="_blank" rel="noreferrer noopener">Ian Tsang</a>, who is doing a three-month work experience placement with the Ensembl Plants team. We talked all about his PhD, what projects he is working on during his time in Ensembl and what he does during his free time. </p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/06/28/getting-to-know-us-ian-tsang-visiting-phd-student/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15474" class="post-15474 post type-post status-publish format-standard hentry category-02-updates tag-alphafold tag-alphamissense tag-ensembl tag-ensembl-vep tag-variation tag-vep"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/05/24/integration-of-alphamissense-scores-into-ensembl/" title="Permalink to Integration of AlphaMissense scores into Ensembl" rel="bookmark">Integration of AlphaMissense scores into Ensembl</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/05/24/integration-of-alphamissense-scores-into-ensembl/" rel="bookmark"><time class="entry-date published" datetime="2024-05-24T11:30:27+01:00" itemprop="datepublished">24th May 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/lpmirabueno/" rel="author" itemprop="url"><span itemprop="name">Louisse Paola Mirabueno</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Integration of AlphaMissense scores into Ensembl</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>We鈥檙e excited to announce the integration of AlphaMissense pathogenicity scores into Ensembl! The display of AlphaMissense data in Ensembl and other EMBL-EBI resources aims to empower scientists to gain new insights, expand the exploration of genetic variation and the tolerance to change of different regions in proteins.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/05/24/integration-of-alphamissense-scores-into-ensembl/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <article itemscope itemtype="http://schema.org/Article" id="post-15429" class="post-15429 post type-post status-publish format-standard hentry category-01-release tag-bioinformatics tag-ensembl tag-ensembl-genomes tag-genomics tag-plants tag-release tag-rest-api tag-vep"> <header class="entry-header"> <h2 class="entry-title" itemprop="name"> <a itemprop="url" href="https://www.ensembl.info/2024/05/13/ensembl-112-has-been-released/" title="Permalink to Ensembl 112 has been released." rel="bookmark">Ensembl 112 has been released.</a> </h2> <div class="entry-meta"><span class="entry-date"><a href="https://www.ensembl.info/2024/05/13/ensembl-112-has-been-released/" rel="bookmark"><time class="entry-date published" datetime="2024-05-13T15:33:16+01:00" itemprop="datepublished">13th May 2024</time></a></span> by <span class="author vcard" itemscope itemprop="author" itemtype="http://schema.org/Person"><a class="url fn n" href="https://www.ensembl.info/author/aleena/" rel="author" itemprop="url"><span itemprop="name">Aleena Mushtaq</span></a></span><span class="sep">·</span><span class="comments-link"><span>Comments Off<span class="screen-reader-text"> on Ensembl 112 has been released.</span></span></span></div> </header> <div class="entry-content" itemprop="articleBody"> <p>We are pleased to announce the release of Ensembl 112, and the corresponding release of Ensembl Genomes 59. We have some exciting new fish species, many more drosophila species and some incredible VEP updates.</p> <a class="btn btn-default btn-sm" href="https://www.ensembl.info/2024/05/13/ensembl-112-has-been-released/">Continue reading <i class="fa fa-angle-double-right"></i></a> </div> </article> <nav class="navigation pagination" aria-label="Posts"> <h2 class="screen-reader-text">Posts navigation</h2> <div class="nav-links"><span aria-current="page" class="page-numbers current">1</span> <a class="page-numbers" href="https://www.ensembl.info/page/2/">2</a> <span class="page-numbers dots">…</span> <a class="page-numbers" href="https://www.ensembl.info/page/69/">69</a> <a class="next page-numbers" href="https://www.ensembl.info/page/2/"><i class="fa fa-chevron-right"></i></a></div> </nav> </div> <footer class="site-info" itemscope itemtype="http://schema.org/WPFooter"> <a href="http://wordpress.org/" title="Semantic Personal Publishing Platform">Proudly powered by WordPress</a>. 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