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AmiGO 2: Term Details for "spore inner membrane" (GO:0140549)
<!DOCTYPE html> <!-- START template: head_open.tmpl --> <html lang="en"> <head> <meta charset="utf-8"> <meta http-equiv="content-type" content="text/html; charset=utf-8"> <meta name="viewport" content="width=device-width, initial-scale=1.0"> <meta name="description" content="AmiGO 2"> <meta name="author" content="Gene Ontology Consortium"> <!-- <meta name="html_url" content="https://amigo.geneontology.org/static"> --> <link rel="shortcut icon" href="https://amigo.geneontology.org/static/images/go-logo-favicon.ico"> <link rel="icon" href="https://amigo.geneontology.org/static/images/go-logo-favicon.ico"> <title>AmiGO 2: Term Details for "spore inner membrane" (GO:0140549)</title> <!-- <link rel="icon" --> <!-- type="image/x-icon" --> <!-- href="https://amigo.geneontology.org/static/images/go-logo-favicon.ico"> --> <!-- END template: head_open.tmpl --> <link rel="stylesheet" type="text/css" href="https://amigo.geneontology.org/static/css/bootstrap.min.css"> <link rel="stylesheet" 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href="https://amigo.geneontology.org/amigo/dd_browse" title="Browse GO terms and view annotation counts.">Browse</a></li> <!-- Software list. --> <li><a href="https://amigo.geneontology.org/amigo/software_list" title="More tools to explore the Gene Ontology">Tools & Resources</a></li> <!-- Help. --> <li><a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Term_Page" title="Help for 'spore inner membrane'">Help</a></li> <!-- Feedback. --> <li><a href="http://wiki.geneontology.org/index.php/AmiGO_2:_Feedback" title="Give feedback on AmiGO 2">Feedback</a></li> <!-- About. --> <li><a href="http://wiki.geneontology.org/index.php/AmiGO_2" title="About AmiGO 2">About</a></li> </ul> <!-- START template: header_search.tmpl --> <!-- page_name = term --> <form action="https://amigo.geneontology.org/amigo/medial_search" id="query-form" class="navbar-form navbar-right" role="search" method="GET"> <div class="form-group"> <input type="text" title="Hint: add a space after completing a word to narrow the search." class="form-control bbop-js-tooltip" name="q" placeholder="Quick search" value="" id="gsf-query"> </div> <button type="submit" title="Search for annotations with the inputted text." class="btn btn-default">Search</button> <!-- Begin: autocomplete_help_link.tmpl --> <!-- Begin: abstract_help_link.tmpl --> <a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Quick_Search" title="More information on Quick Search" class=""><span class="glyphicon glyphicon-question-sign"></span> </a> <!-- End: abstract_help_link.tmpl --> <!-- End: autocomplete_help_link.tmpl --> </form> <!-- END template: header_search.tmpl --> <!-- <p class="navbar-text navbar-right"> --> <!-- <a href="http://geneontology.org"><img class="logo-img" style="height: 50px;" src="https://amigo.geneontology.org/static/images/go-logo-icon.small.png" alt="GO logo" title="Gene Ontology front page"></a> --> <!-- </p> --> <!-- <p> --> <!-- <a href="http://geneontology.org" class="navbar-link">GO</a> --> <!-- </p> --> </div> </div> </div> <!-- END template: header.tmpl --> <!-- START template: content_open.tmpl --> <div class="container amigo-ui-wide-max"> <!-- END template: content_open.tmpl --> <!-- START template: content_title.tmpl --> <div class="page-header"> <h1> spore inner membrane</h1> </div> <!-- END template: content_title.tmpl --> <!-- START template: term_details.tmpl --> <!-- START: noscript_js_limited.tmpl --> <noscript> <div class="panel panel-warning"> <div class="panel-heading"> <h3 class="panel-title">Notice</h3> </div> <div class="panel-body"> <p> Some functionality on this page depends on JavaScript. To fully use the features of AmiGO 2, enable JavaScript in your browser and reload from the landing page. </p> </div> </div> </noscript> <!-- END: noscript-js-limited.tmpl --> <!-- START template: term_details_main.tmpl --> <div class="panel panel-default"> <div class="panel-heading"> <h3 class="panel-title"> Term Information <!-- Begin: abstract_help_link.tmpl --> <a href="http://wiki.geneontology.org/index.php/AmiGO_2_Manual:_Term_Page" title="More information on using this page" class=""><span class="glyphicon glyphicon-question-sign"></span> </a> <!-- End: abstract_help_link.tmpl --> </h3> </div> <div class="panel-body"> <!-- <div style="padding-bottom: 3px;"> --> <div style="float:right;"> <a class="bbop-js-tooltip" title="Let us know if there are any additions, concerns, or other issues that you'd like to share about this data." href="http://help.geneontology.org"> <span class="label label-primary">Feedback <span class="glyphicon glyphicon-heart"></span> </span> </a> </div> <dl class="dl-horizontal amigo-detail-info"> <!-- Acc, name, and ont. --> <dt>Accession</dt> <dd>GO:0140549</dd> <dt>Name</dt> <dd>spore inner membrane</dd> <dt>Ontology</dt> <dd>cellular_component</dd> <!-- <dt>ID Space</dt> --> <!-- <dd>GO</dd> --> <!-- Synonyms --> <dt>Synonyms</dt> <dd id="syn-collapse-syn" class="syn-collapsible">spore membrane</dd> <!-- Alternate IDs --> <dt>Alternate IDs</dt> <dd>None</dd> <!-- Definition --> <dt>Definition</dt> <dd>The membrane surrounding the spore core (endospore core) that separates it from its external environment. <em>Source:</em> <cite><a title="Go to PMID:23202530" href="http://www.ncbi.nlm.nih.gov/pubmed/23202530">PMID:23202530</a></cite> </dd> <!-- Comment. --> <dt>Comment</dt> <dd>None</dd> <!-- Optional GO history. --> <dt>History</dt> <dd>See term <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0140549#term=history" title="See term history.">history for GO:0140549</a> at QuickGO</dd> <!-- Taxon constraints. --> <!-- <dt>Taxon info</dt> --> <!-- --> <!-- --> <!-- <dd> --> <!-- --> <!-- <i>in taxon</i> --> <!-- --> <!-- --> <!-- <a href="http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=2">Bacteria</a> --> <!-- --> <!-- </dd> --> <!-- --> <!-- --> <!-- Chemical reaction participants. --> <dt>Chem. react.</dt> <dd>None</dd> <!-- Subsets --> <dt>Subset</dt> <dd>None</dd> <!-- JS dynamic links created by manager. --> <dt id="prob_related" class="hidden">Related</dt> <dd id="prob_bio" class="hidden"> <a id="prob_bio_href" href="#" class="btn btn-primary btn-xs">Link</a> to all <strong>genes and gene products</strong> annotated to spore inner membrane (<strong>excluding "regulates"</strong>). </dd> <dd id="prob_ann" class="hidden"> <a id="prob_ann_href" href="#" class="btn btn-primary btn-xs">Link</a> to all direct and indirect <strong>annotations</strong> to spore inner membrane (<strong>excluding "regulates"</strong>). </dd> <dd id="prob_ann_dl" class="hidden"> <a id="prob_ann_dl_href" href="#" class="btn btn-primary btn-xs">Link</a> to all direct and indirect <strong>annotations download</strong> (limited to first 10,000) for spore inner membrane (<strong>excluding "regulates"</strong>). </dd> <!-- <\!-- -\-> --> <!-- <dt>Feedback</dt> --> <!-- <dd> --> <!-- Contact the --> <!-- <a href="http://help.geneontology.org" title="GO Helpdesk.">GO Helpdesk</a> --> <!-- if you find mistakes or have concerns --> <!-- about the data you find here. --> <!-- </dd> --> </dl> <div> <a href="/amigo/term/GO:0140549?relation=regulates" class="btn btn-primary"> Include "regulates"</a> <br />For more information, please see the <a href="http://geneontology.org/docs/ontology-relations/">ontology relation documentation</a>. </div> </div> </div> <!-- END template: term_details_main.tmpl --> <!-- Hrm... --> <!-- Display tabbing. --> <ul id="display-tabs" class="nav nav-tabs"> <!-- NOTE: As of RC3, "active" did not work, so still tabbed from JS. --> <!-- <li class="active"> --> <li> <a href="#display-associations-tab" data-toggle="tab">Annotations</a> </li> <li> <a href="#display-graphics-tab" data-toggle="tab">Graph Views</a> </li> <li> <a href="#display-lineage-tab" data-toggle="tab">Inferred Tree View</a> </li> <li> <!-- <a href="#display-sentences-tab" data-toggle="tab">Ancestors and Children</a> --> <a href="#display-sentences-tab" data-toggle="tab">Neighborhood</a> </li> <li> <a href="#display-xref-tab" data-toggle="tab">Mappings</a> </li> <!-- <li> --> <!-- <a href="#display-out-tab" data-toggle="tab">Other Views</a> --> <!-- </li> --> <!-- <li> --> <!-- <a href="#display-down-tab" data-toggle="tab">Downloads</a> --> <!-- </li> --> </ul> <div class="tab-content"> <!-- <div class="container"> --> <!-- </div> --> <div id="display-associations-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer amigo-live-search-results-unbounder"> <div class="panel-body"> <!-- START template: annotation_search.tmpl --> <div id="results-area" class="row"> <div class="col-xs-12 col-sm-12 col-md-3 col-lg-3"> <div> <h4>Filter results</h4> <div id="accordion" class="bbop-widget-set-live-filters"> Loading... </div> </div> </div> <div class="col-xs-12 col-sm-12 col-md-9 col-lg-9"> <div id="pager" class="bbop-widget-set-live-pager"></div> <div id="results" class="bbop-widget-set-live-results"> pending... </div> </div> </div> <!-- END template: annotation_search.tmpl --> </div> </div> </div> <div id="display-graphics-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_graphics.tmpl --> <h5> View this term in <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0140549" title="Go to the QuickGO term page for GO:0140549">QuickGO</a>. </h5> <p> <a href="http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0140549" title="Go to the QuickGO term page for GO:0140549"> <img src="https://amigo.geneontology.org/visualize?inline=false&term=GO:0140549&beta=0&mode=quickgo" alt="Graph of GO:0140549 from QuickGO" /> </a> </p> <h5>Additional external viewing options</h5> <ul class="list-unstyled"> <li><a href="http://ols.wordvis.com/q=GO:0140549" title="View the graph in the OLSVis viewer">OLSVis (interactive)</a></li> </ul> <h5>Additional internal viewing options</h5> <ul class="list-unstyled"> <!-- TODO: do this with breadcrumbsy string (taken from REST URL) --> <!-- <li>Last action: unknown</li> --> <li><a href="https://amigo.geneontology.org/visualize?mode=amigo&format=png&term_data_type=string&inline=false&term_data=GO%3A0140549" title="View the graph as a static PNG image">Graphical view (PNG)</a></li> <li><a href="https://amigo.geneontology.org/visualize?format=svg&mode=amigo&term_data=GO%3A0140549&inline=false&term_data_type=string" title="View the graph as an interactive SVG+JS document">Graphical view (SVG)</a></li> <!-- One day this will be out of experimental. --> <!-- <li><a href="" --> <!-- title="Navigate the GO, using the current term as a seed">GO Navigation</a></li> --> </ul> <!-- END template: term_details_graphics.tmpl --> </div> </div> </div> <div id="display-lineage-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_lineage.tmpl --> <!-- <h4>Term lineage for spore inner membrane, including inferred links:</h4> --> <ul class="list-unstyled"> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb9481a0)--> <!-- number_of_spaces = 0--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/CARO:0030000#display-lineage-tab" title="Go to biological entity">CARO:0030000 biological entity</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb947fd8)--> <!-- number_of_spaces = 1--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/CARO:0000000#display-lineage-tab" title="Go to anatomical entity">CARO:0000000 anatomical entity</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb948338)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/UBERON:0001062#display-lineage-tab" title="Go to anatomical entity">UBERON:0001062 anatomical entity</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb8f5600)--> <!-- number_of_spaces = 2--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/CARO:0000006#display-lineage-tab" title="Go to material anatomical entity">CARO:0000006 material anatomical entity</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb9483e0)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/CARO:0000003#display-lineage-tab" title="Go to connected anatomical structure">CARO:0000003 connected anatomical structure</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb8f63f8)--> <!-- number_of_spaces = 3--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/UBERON:0000465#display-lineage-tab" title="Go to material anatomical entity">UBERON:0000465 material anatomical entity</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb94abb8)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/UBERON:0000061#display-lineage-tab" title="Go to anatomical structure">UBERON:0000061 anatomical structure</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb947a08)--> <!-- number_of_spaces = 4--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0005575#display-lineage-tab" title="Go to cellular_component">GO:0005575 cellular_component</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb8f5900)--> <!-- number_of_spaces = 5--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[Inferred is_a relation]" title="Inferred is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0110165#display-lineage-tab" title="Go to cellular anatomical structure">GO:0110165 cellular anatomical structure</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb947bb8)--> <!-- number_of_spaces = 6--> <!-- override_image = --> <!-- override_title = --> <!-- override_link = --> <!-- override_bold = --> <li> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[is_a relation]" title="is_a relation" /> <a href="https://amigo.geneontology.org/amigo/term/GO:0016020#display-lineage-tab" title="Go to membrane">GO:0016020 membrane</a> </li> <!-- END template: term_details_entry.tmpl --> <!-- START template: term_details_entry.tmpl --> <!-- graph_entry = HASH(0x560feb935300)--> <!-- number_of_spaces = 7--> <!-- override_image = https://amigo.geneontology.org/static/images/term_lineage_wedge.png--> <!-- override_title = Current term--> <!-- override_link = 1--> <!-- override_bold = 1--> <li> <img src="https://amigo.geneontology.org/static/images/term_lineage_wedge.png" alt="[Current term]" title="Current term" /> <span style="font-weight: bold;">GO:0140549 spore inner membrane</span> </li> <!-- END template: term_details_entry.tmpl --> </ul> <!-- END template: term_details_lineage.tmpl --> </div> </div> </div> <div id="display-sentences-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_sentences.tmpl --> <h5 class="text-center"> Parents of spore inner membrane (GO:0140549) </h5> <table id="all-table-above" class="table table-striped table-hover"> <!-- START template: term_details_neighborhood_head.tmpl --> <thead> <tr> <th style="width: 42%">subject<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by subject" alt="[Reorder by subject]" /></th> <th style="width: 16%">relation<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by relation" alt="[Reorder by relation]" /></th> <th style="width: 42%">object<img style="border: 0px;" src="https://amigo.geneontology.org/static/images/reorder.gif" title="Reorder by object" alt="[Reorder by object]" /></th> </tr> </thead> <!-- END template: term_details_neighborhood_head.tmpl --> <tbody> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x560feb935300) --> <!-- object_chunk = HASH(0x560feb8f3470) --> <!-- even_odd_rows = 0 --> <!-- munge_id_tail = _a --> <!-- count_type = object --> <tr class=""> <td> spore inner membrane </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/RO:0002162.gif" alt="[RO:0002162 relation]" title="RO:0002162 relation" /> RO:0002162 </span> </td> <td> <a href="https://amigo.geneontology.org/amigo/term/NCBITaxon:2" title="Go to Bacteria">Bacteria (NCBITaxon:2)</a> </td> </tr> <!-- END template: term_details_re_row.tmpl --> <!-- START template: term_details_re_row.tmpl --> <!-- subject_chunk = HASH(0x560feb935300) --> <!-- object_chunk = HASH(0x560feb94ad08) --> <!-- even_odd_rows = 1 --> <!-- munge_id_tail = _a --> <!-- count_type = object --> <tr class=""> <td> spore inner membrane </td> <td> <span class="nowrap"> <img src="https://amigo.geneontology.org/static/images/is_a.gif" alt="[is_a relation]" title="is_a relation" /> is_a </span> </td> <td> <a href="https://amigo.geneontology.org/amigo/term/GO:0016020" title="Go to membrane">membrane (GO:0016020)</a> </td> </tr> <!-- END template: term_details_re_row.tmpl --> </tbody> </table> <p> This term has no children. </p> <!-- END template: term_details_sentences.tmpl --> </div> </div> </div> <div id="display-xref-tab" class="tab-pane"> <div class="panel panel-default amigo-detail-tab-spacer"> <div class="panel-body"> <!-- START template: term_details_xrefs.tmpl --> <dd> <!-- <img height="16px" src="https://amigo.geneontology.org/static/images/gonuts.link.jpg" alt="GONUTS" /> --><small><strong>GONUTS</strong></small> <a href="" title="Community note for ">Add</a> usage comments for this term on the <abbr title="GO Normal Usage Tracking System" class="initialism">GONUTS</abbr> wiki. </dd> <!-- END template: term_details_xrefs.tmpl --> </div> </div> </div> </div> <!-- END template: term_details.tmpl --> <!-- Begin: footer.tmpl --> <!-- release_date = --> <!-- version = 2.5.17 --> <!-- 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